Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 CYP2T3P-201ENST00000601990 817 ntBASIC18.52■□□□□ 0.56
LINGO3P0C6S8 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.52■□□□□ 0.56
LINGO3P0C6S8 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINGO3P0C6S8 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 AL691432.2-201ENST00000607222 2038 ntBASIC18.52■□□□□ 0.55
LINGO3P0C6S8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
LINGO3P0C6S8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 MKRN4P-201ENST00000444706 1521 ntBASIC18.51■□□□□ 0.55
LINGO3P0C6S8 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 GPX1P1-201ENST00000388829 606 ntBASIC18.51■□□□□ 0.55
LINGO3P0C6S8 GUSBP6-202ENST00000438529 1198 ntBASIC18.51■□□□□ 0.55
LINGO3P0C6S8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
LINGO3P0C6S8 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 KRT18P68-201ENST00000392293 1000 ntBASIC18.5■□□□□ 0.55
LINGO3P0C6S8 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 AL355472.2-201ENST00000422958 438 ntBASIC18.5■□□□□ 0.55
LINGO3P0C6S8 TSPY6P-201ENST00000448518 926 ntBASIC18.5■□□□□ 0.55
LINGO3P0C6S8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.5■□□□□ 0.55
LINGO3P0C6S8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
LINGO3P0C6S8 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.49■□□□□ 0.55
LINGO3P0C6S8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms