Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 MKRN4P-201ENST00000444706 1521 ntBASIC14.46□□□□□ -0.09
LTAP01374 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LTAP01374 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LTAP01374 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.46□□□□□ -0.09
LTAP01374 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC14.46□□□□□ -0.09
LTAP01374 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
LTAP01374 AL589743.5-201ENST00000616611 1050 ntBASIC14.46□□□□□ -0.09
LTAP01374 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LTAP01374 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LTAP01374 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTAP01374 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LTAP01374 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
LTAP01374 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTAP01374 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LTAP01374 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LTAP01374 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.46□□□□□ -0.1
LTAP01374 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.46□□□□□ -0.1
LTAP01374 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.46□□□□□ -0.1
LTAP01374 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LTAP01374 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LTAP01374 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
LTAP01374 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 FEM1AP3-201ENST00000403722 1741 ntBASIC14.45□□□□□ -0.1
LTAP01374 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC14.45□□□□□ -0.1
LTAP01374 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.45□□□□□ -0.1
LTAP01374 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
LTAP01374 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LTAP01374 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC14.45□□□□□ -0.1
LTAP01374 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
LTAP01374 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.45□□□□□ -0.1
LTAP01374 AC083906.6-201ENST00000641366 219 ntBASIC14.45□□□□□ -0.1
LTAP01374 AC090340.1-201ENST00000620778 4980 ntBASIC14.45□□□□□ -0.1
LTAP01374 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.45□□□□□ -0.1
LTAP01374 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
LTAP01374 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.45□□□□□ -0.1
LTAP01374 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 HCG11-201ENST00000411553 5696 ntBASIC14.45□□□□□ -0.1
LTAP01374 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.45□□□□□ -0.1
LTAP01374 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LTAP01374 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
LTAP01374 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
LTAP01374 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LTAP01374 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.44□□□□□ -0.1
LTAP01374 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.44□□□□□ -0.1
LTAP01374 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.44□□□□□ -0.1
LTAP01374 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.44□□□□□ -0.1
LTAP01374 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LTAP01374 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.44□□□□□ -0.1
LTAP01374 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.44□□□□□ -0.1
LTAP01374 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LTAP01374 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.44□□□□□ -0.1
LTAP01374 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LTAP01374 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
LTAP01374 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.44□□□□□ -0.1
LTAP01374 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LTAP01374 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.44□□□□□ -0.1
LTAP01374 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms