Protein–RNA interactions for Protein: O00743

PPP6C, Serine/threonine-protein phosphatase 6 catalytic subunit, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6CO00743 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PPP6CO00743 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PPP6CO00743 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PPP6CO00743 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PPP6CO00743 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.66■□□□□ 0.58
PPP6CO00743 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PPP6CO00743 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.65■□□□□ 0.58
PPP6CO00743 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PPP6CO00743 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PPP6CO00743 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 POM121L13P-201ENST00000422362 380 ntBASIC18.65■□□□□ 0.58
PPP6CO00743 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.65■□□□□ 0.58
PPP6CO00743 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.65■□□□□ 0.58
PPP6CO00743 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.65■□□□□ 0.58
PPP6CO00743 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PPP6CO00743 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PPP6CO00743 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 AL031598.1-201ENST00000561511 1773 ntBASIC18.65■□□□□ 0.58
PPP6CO00743 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PPP6CO00743 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PPP6CO00743 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.65■□□□□ 0.58
PPP6CO00743 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.65■□□□□ 0.58
PPP6CO00743 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PPP6CO00743 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PPP6CO00743 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
PPP6CO00743 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
PPP6CO00743 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.58
PPP6CO00743 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.64■□□□□ 0.57
PPP6CO00743 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.64■□□□□ 0.57
PPP6CO00743 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.64■□□□□ 0.57
PPP6CO00743 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.64■□□□□ 0.57
PPP6CO00743 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.64■□□□□ 0.57
PPP6CO00743 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
PPP6CO00743 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PPP6CO00743 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.64■□□□□ 0.57
PPP6CO00743 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.63■□□□□ 0.57
PPP6CO00743 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
PPP6CO00743 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PPP6CO00743 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PPP6CO00743 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.63■□□□□ 0.57
PPP6CO00743 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.63■□□□□ 0.57
PPP6CO00743 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.63■□□□□ 0.57
PPP6CO00743 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PPP6CO00743 FEM1AP3-201ENST00000403722 1741 ntBASIC18.63■□□□□ 0.57
PPP6CO00743 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PPP6CO00743 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PPP6CO00743 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.62■□□□□ 0.57
PPP6CO00743 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PPP6CO00743 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms