Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 TBPL1-205ENST00000457715 865 ntTSL 520.45■□□□□ 0.863e-6■■■■□ 19.8
XRN2Q9H0D6 RGS12-222ENST00000513784 710 ntTSL 220.44■□□□□ 0.865e-6■■■■□ 19.8
XRN2Q9H0D6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.863e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-205ENST00000455067 530 ntTSL 420.27■□□□□ 0.843e-6■■■■□ 19.8
XRN2Q9H0D6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.833e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.85e-6■■■■□ 19.8
XRN2Q9H0D6 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.06■□□□□ 0.83e-6■■■■□ 19.8
XRN2Q9H0D6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC20.04■□□□□ 0.83e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-203ENST00000444801 568 ntTSL 319.99■□□□□ 0.793e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC19.96■□□□□ 0.793e-6■■■■□ 19.8
XRN2Q9H0D6 ISG15-202ENST00000624652 657 ntTSL 319.94■□□□□ 0.783e-6■■■■□ 19.8
XRN2Q9H0D6 KCNQ1-205ENST00000496887 582 ntTSL 519.86■□□□□ 0.773e-6■■■■□ 19.8
XRN2Q9H0D6 TRIM65-203ENST00000540812 385 ntTSL 219.83■□□□□ 0.773e-6■■■■□ 19.8
XRN2Q9H0D6 TSEN54-211ENST00000583818 765 ntTSL 519.81■□□□□ 0.763e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-204ENST00000585606 2071 ntTSL 219.78■□□□□ 0.763e-6■■■■□ 19.8
XRN2Q9H0D6 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.753e-6■■■■□ 19.8
XRN2Q9H0D6 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.58■□□□□ 0.723e-6■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.73e-6■■■■□ 19.8
XRN2Q9H0D6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.36■□□□□ 0.693e-6■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-203ENST00000586486 1613 ntTSL 1 (best)19.11■□□□□ 0.653e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL22-203ENST00000431430 572 ntTSL 419.01■□□□□ 0.636e-8■■■■□ 19.8
XRN2Q9H0D6 PPP6R1-206ENST00000591323 848 ntTSL 319■□□□□ 0.633e-6■■■■□ 19.8
XRN2Q9H0D6 RNF43-206ENST00000582293 324 ntTSL 218.97■□□□□ 0.633e-6■■■■□ 19.8
XRN2Q9H0D6 MAP3K11-209ENST00000530949 546 ntTSL 418.96■□□□□ 0.633e-6■■■■□ 19.8
XRN2Q9H0D6 BDH1-212ENST00000476764 680 ntTSL 1 (best)18.95■□□□□ 0.625e-6■■■■□ 19.8
XRN2Q9H0D6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.623e-6■■■■□ 19.8
XRN2Q9H0D6 SLC2A9-206ENST00000505104 1659 ntTSL 1 (best)18.88■□□□□ 0.611e-6■■■■□ 19.8
XRN2Q9H0D6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.63e-6■■■■□ 19.8
XRN2Q9H0D6 NOP2-205ENST00000536124 689 ntTSL 518.76■□□□□ 0.593e-6■■■■□ 19.8
XRN2Q9H0D6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.593e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-213ENST00000454132 2922 ntTSL 218.6■□□□□ 0.573e-6■■■■□ 19.8
XRN2Q9H0D6 MAP4-212ENST00000468075 487 ntTSL 518.55■□□□□ 0.568e-7■■■■□ 19.8
XRN2Q9H0D6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.553e-6■■■■□ 19.8
XRN2Q9H0D6 RGS12-224ENST00000514268 2751 ntTSL 518.45■□□□□ 0.545e-6■■■■□ 19.8
XRN2Q9H0D6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.543e-6■■■■□ 19.8
XRN2Q9H0D6 DUS3L-211ENST00000591560 768 ntTSL 518.39■□□□□ 0.533e-6■■■■□ 19.8
XRN2Q9H0D6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.533e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.522e-8■■■■□ 19.8
XRN2Q9H0D6 LONP1-208ENST00000589473 793 ntTSL 318.22■□□□□ 0.512e-11■■■■□ 19.8
XRN2Q9H0D6 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.493e-6■■■■□ 19.8
XRN2Q9H0D6 DUS3L-212ENST00000592468 797 ntTSL 518.03■□□□□ 0.483e-6■■■■□ 19.8
XRN2Q9H0D6 NOP2-209ENST00000538420 572 ntTSL 418.02■□□□□ 0.483e-6■■■■□ 19.8
XRN2Q9H0D6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.472e-11■■■■□ 19.8
XRN2Q9H0D6 CARHSP1-213ENST00000569398 442 ntTSL 217.92■□□□□ 0.463e-6■■■■□ 19.8
XRN2Q9H0D6 TRIM65-204ENST00000543309 865 ntTSL 217.85■□□□□ 0.453e-6■■■■□ 19.8
XRN2Q9H0D6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.453e-6■■■■□ 19.8
XRN2Q9H0D6 CARHSP1-212ENST00000568968 461 ntTSL 217.76■□□□□ 0.433e-6■■■■□ 19.8
XRN2Q9H0D6 SFXN5-204ENST00000416579 895 ntTSL 317.7■□□□□ 0.423e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-216ENST00000641834 1718 nt17.56■□□□□ 0.42e-8■■■■□ 19.8
XRN2Q9H0D6 ADSL-222ENST00000637669 1927 ntTSL 517.43■□□□□ 0.383e-6■■■■□ 19.8
XRN2Q9H0D6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.383e-6■■■■□ 19.8
XRN2Q9H0D6 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.365e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.366e-8■■■■□ 19.8
XRN2Q9H0D6 TBPL1-204ENST00000416965 991 ntTSL 317.24■□□□□ 0.353e-6■■■■□ 19.8
XRN2Q9H0D6 SGSM3-204ENST00000457767 1086 ntTSL 217.23■□□□□ 0.353e-6■■■■□ 19.8
XRN2Q9H0D6 VAC14-211ENST00000568886 2151 ntTSL 1 (best)17.16■□□□□ 0.343e-6■■■■□ 19.8
XRN2Q9H0D6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.333e-6■■■■□ 19.8
XRN2Q9H0D6 SFXN5-215ENST00000482542 546 ntTSL 417.1■□□□□ 0.333e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL22-207ENST00000458248 742 ntTSL 317.07■□□□□ 0.326e-8■■■■□ 19.8
XRN2Q9H0D6 E4F1-209ENST00000569796 5931 ntTSL 217.04■□□□□ 0.323e-6■■■■□ 19.8
XRN2Q9H0D6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.316e-7■■■■□ 19.8
XRN2Q9H0D6 KLHL22-205ENST00000444967 1045 ntTSL 316.92■□□□□ 0.36e-8■■■■□ 19.8
XRN2Q9H0D6 C19orf48-212ENST00000600373 709 ntTSL 216.89■□□□□ 0.292e-8■■■■□ 19.8
XRN2Q9H0D6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.283e-10■■■■□ 19.8
XRN2Q9H0D6 ACTB-213ENST00000493945 1236 ntTSL 516.8■□□□□ 0.282e-17■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.273e-6■■■■□ 19.8
XRN2Q9H0D6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.271e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-206ENST00000558049 565 ntTSL 416.63■□□□□ 0.255e-6■■■■□ 19.8
XRN2Q9H0D6 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.253e-6■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.253e-6■■■■□ 19.8
XRN2Q9H0D6 VAC14-210ENST00000568548 2945 ntTSL 1 (best)16.61■□□□□ 0.253e-6■■■■□ 19.8
XRN2Q9H0D6 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.56■□□□□ 0.243e-6■■■■□ 19.8
XRN2Q9H0D6 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.243e-6■■■■□ 19.8
XRN2Q9H0D6 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.47■□□□□ 0.233e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.235e-6■■■■□ 19.8
XRN2Q9H0D6 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.223e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.4■□□□□ 0.223e-6■■■■□ 19.8
XRN2Q9H0D6 ACSF3-207ENST00000537155 848 ntTSL 216.39■□□□□ 0.213e-6■■■■□ 19.8
XRN2Q9H0D6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.28e-7■■■■□ 19.8
XRN2Q9H0D6 KLHL22-204ENST00000443285 792 ntTSL 416.3■□□□□ 0.26e-8■■■■□ 19.8
XRN2Q9H0D6 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.21e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL22-212ENST00000494929 550 ntTSL 416.26■□□□□ 0.196e-8■■■■□ 19.8
XRN2Q9H0D6 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.192e-8■■■■□ 19.8
XRN2Q9H0D6 KLHL22-209ENST00000479601 1389 ntTSL 516.18■□□□□ 0.186e-8■■■■□ 19.8
XRN2Q9H0D6 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.183e-6■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-201ENST00000585325 598 ntTSL 416.12■□□□□ 0.173e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-209ENST00000493692 951 ntTSL 516.11■□□□□ 0.173e-6■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-202ENST00000585540 501 ntTSL 316.08■□□□□ 0.163e-6■■■■□ 19.8
XRN2Q9H0D6 ACSF3-213ENST00000542688 2024 ntTSL 516.06■□□□□ 0.163e-6■■■■□ 19.8
XRN2Q9H0D6 MAP3K11-212ENST00000534110 585 ntTSL 416.06■□□□□ 0.163e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-206ENST00000596554 727 ntTSL 315.97■□□□□ 0.152e-8■■■■□ 19.8
XRN2Q9H0D6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.133e-6■■■■□ 19.8
XRN2Q9H0D6 ECHDC2-218ENST00000493896 714 ntTSL 315.76■□□□□ 0.113e-6■■■■□ 19.8
XRN2Q9H0D6 DUS3L-204ENST00000589085 2301 ntTSL 515.72■□□□□ 0.113e-6■■■■□ 19.8
XRN2Q9H0D6 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.13e-7■■■■□ 19.8
XRN2Q9H0D6 TAF4-205ENST00000488539 645 ntTSL 515.63■□□□□ 0.093e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-203ENST00000593287 578 ntTSL 515.56■□□□□ 0.082e-8■■■■□ 19.8
XRN2Q9H0D6 KRT18P15-201ENST00000458108 1291 ntBASIC15.55■□□□□ 0.083e-6■■■■□ 19.8
XRN2Q9H0D6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.073e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-202ENST00000442798 1976 ntTSL 215.5■□□□□ 0.073e-6■■■■□ 19.8
Retrieved 100 of 21,068 protein–RNA pairs in 93.6 ms