RNA–Protein interactions for RNA: ENST00000542688.5

ACSF3-213, Transcript of acyl-CoA synthetase family member 3, humanhuman

TSL 5

Gene ACSF3, Length 2,024 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSF3-213ENST00000542688 NISCHQ9Y2I1 1504 aa32.4■■■□□ 2.78
ACSF3-213ENST00000542688 HRCP23327 699 aa28.87■■■□□ 2.21
ACSF3-213ENST00000542688 PELP1Q8IZL8 1130 aaKnown RBP28.33■■■□□ 2.13
ACSF3-213ENST00000542688 SHROOM4Q9ULL8 1493 aa28.14■■■□□ 2.09
ACSF3-213ENST00000542688 SUPT5HO00267 1087 aaKnown RBP28.1■■■□□ 2.09
ACSF3-213ENST00000542688 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
ACSF3-213ENST00000542688 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
ACSF3-213ENST00000542688 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
ACSF3-213ENST00000542688 DCAF1Q9Y4B6 1507 aa27.89■■■□□ 2.06
ACSF3-213ENST00000542688 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
ACSF3-213ENST00000542688 PPARGC1BQ86YN6 1023 aaKnown RBP27.85■■■□□ 2.05
ACSF3-213ENST00000542688 ZCCHC6Q5VYS8 1495 aaKnown RBP27.64■■■□□ 2.02
ACSF3-213ENST00000542688 ZEB1P37275 1124 aaPredicted RBP27.46■■□□□ 1.99
ACSF3-213ENST00000542688 TRIM26Q12899 539 aaPredicted RBP27.41■■□□□ 1.98
ACSF3-213ENST00000542688 MYT1Q01538 1121 aa27.4■■□□□ 1.98
ACSF3-213ENST00000542688 SCAF1Q9H7N4 1312 aaKnown RBP27.16■■□□□ 1.94
ACSF3-213ENST00000542688 LOC105371045A0A1W2PR82 267 aa26.96■■□□□ 1.91
ACSF3-213ENST00000542688 ACIN1Q9UKV3 1341 aaKnown RBP26.66■■□□□ 1.86
ACSF3-213ENST00000542688 CENPBP07199 599 aaPredicted RBP26.5■■□□□ 1.83
ACSF3-213ENST00000542688 NEUROD1Q13562 356 aa26.39■■□□□ 1.82
ACSF3-213ENST00000542688 ABCC9O60706 1549 aa26.38■■□□□ 1.81
ACSF3-213ENST00000542688 DCAF8L2P0C7V8 631 aa26.33■■□□□ 1.81
ACSF3-213ENST00000542688 GTF3C3Q9Y5Q9 886 aa26.31■■□□□ 1.8
ACSF3-213ENST00000542688 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
ACSF3-213ENST00000542688 DIEXFQ68CQ4 756 aaKnown RBP26.14■■□□□ 1.78
ACSF3-213ENST00000542688 NACADO15069 1562 aa26.08■■□□□ 1.76
ACSF3-213ENST00000542688 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
ACSF3-213ENST00000542688 RB1CC1Q8TDY2 1594 aa25.99■■□□□ 1.75
ACSF3-213ENST00000542688 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
ACSF3-213ENST00000542688 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.92■■□□□ 1.74
ACSF3-213ENST00000542688 FAM9AQ8IZU1 332 aaPredicted RBP25.88■■□□□ 1.73
ACSF3-213ENST00000542688 TTBK1Q5TCY1 1321 aaPredicted RBP25.76■■□□□ 1.71
ACSF3-213ENST00000542688 ZNF316A6NFI3 1004 aaPredicted RBP25.72■■□□□ 1.71
ACSF3-213ENST00000542688 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
ACSF3-213ENST00000542688 SCRIBQ14160 1630 aa25.65■■□□□ 1.7
ACSF3-213ENST00000542688 CLSPNQ9HAW4 1339 aa25.62■■□□□ 1.69
ACSF3-213ENST00000542688 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
ACSF3-213ENST00000542688 YTHDC1Q96MU7 727 aaKnown RBP25.47■■□□□ 1.67
ACSF3-213ENST00000542688 UNC13AQ9UPW8 1703 aa25.39■■□□□ 1.66
ACSF3-213ENST00000542688 MIER1Q8N108 512 aa25.34■■□□□ 1.65
ACSF3-213ENST00000542688 EIF4G1Q04637 1599 aaKnown RBP25.31■■□□□ 1.64
ACSF3-213ENST00000542688 CEP162Q5TB80 1403 aa25.3■■□□□ 1.64
ACSF3-213ENST00000542688 TNIKQ9UKE5 1360 aa25.23■■□□□ 1.63
ACSF3-213ENST00000542688 ANP32EQ9BTT0 268 aa25.2■■□□□ 1.63
ACSF3-213ENST00000542688 BAZ1AQ9NRL2 1556 aaPredicted RBP25.19■■□□□ 1.62
ACSF3-213ENST00000542688 MROH2BQ7Z745 1585 aa25.16■■□□□ 1.62
ACSF3-213ENST00000542688 EEA1Q15075 1411 aa25.14■■□□□ 1.62
ACSF3-213ENST00000542688 SUPT16HQ9Y5B9 1047 aaKnown RBP25.11■■□□□ 1.61
ACSF3-213ENST00000542688 WIZO95785 1651 aa25.11■■□□□ 1.61
ACSF3-213ENST00000542688 BICRAQ9NZM4 1560 aa25.08■■□□□ 1.6
ACSF3-213ENST00000542688 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
ACSF3-213ENST00000542688 BCL11AQ9H165 835 aa25.05■■□□□ 1.6
ACSF3-213ENST00000542688 TSHZ2Q9NRE2 1034 aa24.99■■□□□ 1.59
ACSF3-213ENST00000542688 GOLGA3Q08378 1498 aa24.95■■□□□ 1.58
ACSF3-213ENST00000542688 CCDC88BA6NC98 1476 aa24.94■■□□□ 1.58
ACSF3-213ENST00000542688 ABCC8Q09428 1581 aa24.88■■□□□ 1.57
ACSF3-213ENST00000542688 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
ACSF3-213ENST00000542688 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.57
ACSF3-213ENST00000542688 PABPN1Q86U42 306 aaKnown RBP eCLIP24.81■■□□□ 1.56
ACSF3-213ENST00000542688 SOGA1O94964 1423 aa24.81■■□□□ 1.56
ACSF3-213ENST00000542688 UBTFP17480 764 aaKnown RBP24.8■■□□□ 1.56
ACSF3-213ENST00000542688 HNRNPUL2Q1KMD3 747 aaKnown RBP24.8■■□□□ 1.56
ACSF3-213ENST00000542688 KIF21BO75037 1637 aa24.72■■□□□ 1.55
ACSF3-213ENST00000542688 CEP164Q9UPV0 1460 aa24.7■■□□□ 1.54
ACSF3-213ENST00000542688 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
ACSF3-213ENST00000542688 SMARCA2P51531 1590 aa24.68■■□□□ 1.54
ACSF3-213ENST00000542688 SMARCA4P51532 1647 aa24.65■■□□□ 1.54
ACSF3-213ENST00000542688 APLP2Q06481 763 aa24.62■■□□□ 1.53
ACSF3-213ENST00000542688 CLIP1P30622 1438 aa24.62■■□□□ 1.53
ACSF3-213ENST00000542688 BAZ1BQ9UIG0 1483 aaKnown RBP24.6■■□□□ 1.53
ACSF3-213ENST00000542688 DHX57Q6P158 1386 aaKnown RBP24.59■■□□□ 1.53
ACSF3-213ENST00000542688 RUSC2Q8N2Y8 1516 aa24.59■■□□□ 1.53
ACSF3-213ENST00000542688 NEFLP07196 543 aa24.44■■□□□ 1.5
ACSF3-213ENST00000542688 RBM19Q9Y4C8 960 aaKnown RBP24.41■■□□□ 1.5
ACSF3-213ENST00000542688 PEG3Q9GZU2 1588 aa24.4■■□□□ 1.5
ACSF3-213ENST00000542688 FKBP8Q14318 412 aa24.39■■□□□ 1.5
ACSF3-213ENST00000542688 CUX2O14529 1486 aa24.38■■□□□ 1.49
ACSF3-213ENST00000542688 MYT1LQ9UL68 1186 aa24.34■■□□□ 1.49
ACSF3-213ENST00000542688 BCANQ96GW7 911 aa24.33■■□□□ 1.49
ACSF3-213ENST00000542688 RRBP1Q9P2E9 1410 aaKnown RBP24.27■■□□□ 1.48
ACSF3-213ENST00000542688 SYNJ1O43426 1573 aa24.24■■□□□ 1.47
ACSF3-213ENST00000542688 FANCIQ9NVI1 1328 aa24.23■■□□□ 1.47
ACSF3-213ENST00000542688 ATAD2BQ9ULI0 1458 aa24.22■■□□□ 1.47
ACSF3-213ENST00000542688 RAPGEF2Q9Y4G8 1499 aa24.21■■□□□ 1.47
ACSF3-213ENST00000542688 ERICH6Q7L0X2 663 aa24.18■■□□□ 1.46
ACSF3-213ENST00000542688 CCER2I3L3R5 266 aa24.17■■□□□ 1.46
ACSF3-213ENST00000542688 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
ACSF3-213ENST00000542688 KCNH8Q96L42 1107 aa24.15■■□□□ 1.46
ACSF3-213ENST00000542688 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
ACSF3-213ENST00000542688 MSH5O43196 834 aa24.08■■□□□ 1.45
ACSF3-213ENST00000542688 CCNB3Q8WWL7 1395 aa24.08■■□□□ 1.44
ACSF3-213ENST00000542688 MAPKBP1O60336 1514 aa24.05■■□□□ 1.44
ACSF3-213ENST00000542688 NCAPD3P42695 1498 aa24.05■■□□□ 1.44
ACSF3-213ENST00000542688 HMGXB3Q12766 1538 aa24.04■■□□□ 1.44
ACSF3-213ENST00000542688 CDK11AQ9UQ88 783 aaPredicted RBP24.03■■□□□ 1.44
ACSF3-213ENST00000542688 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
ACSF3-213ENST00000542688 ANP32CO43423 234 aa23.99■■□□□ 1.43
ACSF3-213ENST00000542688 PPP1R15AO75807 674 aaPredicted RBP23.98■■□□□ 1.43
ACSF3-213ENST00000542688 DDX10Q13206 875 aaKnown RBP23.98■■□□□ 1.43
ACSF3-213ENST00000542688 ITGAEP38570 1179 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms