Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 BRI3-207ENST00000539286 699 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 GALNS-213ENST00000569433 723 ntTSL 3 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 PODN-203ENST00000395871 2744 ntTSL 5 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
LINC00479Q96M42 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
LINC00479Q96M42 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 AC067852.2-201ENST00000590513 2313 ntBASIC14.68□□□□□ -0.06
LINC00479Q96M42 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 KRT18P68-201ENST00000392293 1000 ntBASIC14.68□□□□□ -0.06
LINC00479Q96M42 YBX1P1-201ENST00000445822 960 ntBASIC14.68□□□□□ -0.06
LINC00479Q96M42 AL162412.1-201ENST00000567129 965 ntBASIC14.68□□□□□ -0.06
LINC00479Q96M42 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 ZNF815P-204ENST00000434898 1737 ntBASIC14.68□□□□□ -0.06
LINC00479Q96M42 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC14.68□□□□□ -0.06
LINC00479Q96M42 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
LINC00479Q96M42 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 RAB43-208ENST00000615093 783 ntTSL 5 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
LINC00479Q96M42 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
LINC00479Q96M42 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
LINC00479Q96M42 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.66□□□□□ -0.06
LINC00479Q96M42 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms