Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH11P55287 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH11P55287 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDH11P55287 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDH11P55287 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.59■□□□□ 0.41
CDH11P55287 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDH11P55287 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH11P55287 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.59■□□□□ 0.41
CDH11P55287 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDH11P55287 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
CDH11P55287 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH11P55287 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH11P55287 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
CDH11P55287 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDH11P55287 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH11P55287 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH11P55287 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH11P55287 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH11P55287 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH11P55287 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.58■□□□□ 0.4
CDH11P55287 AL158047.1-201ENST00000445918 881 ntBASIC17.58■□□□□ 0.4
CDH11P55287 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC17.58■□□□□ 0.4
CDH11P55287 RPS2P52-201ENST00000469610 820 ntBASIC17.58■□□□□ 0.4
CDH11P55287 OR2A1-AS1-207ENST00000486094 819 ntBASIC17.58■□□□□ 0.4
CDH11P55287 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 C2orf69P4-201ENST00000565394 541 ntBASIC17.58■□□□□ 0.4
CDH11P55287 SOX15-203ENST00000570788 1093 ntBASIC17.58■□□□□ 0.4
CDH11P55287 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH11P55287 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 CROCCP3-202ENST00000420820 1947 ntBASIC17.58■□□□□ 0.4
CDH11P55287 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.58■□□□□ 0.4
CDH11P55287 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CDH11P55287 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CDH11P55287 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDH11P55287 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CDH11P55287 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH11P55287 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 GCSHP5-201ENST00000443090 522 ntBASIC17.57■□□□□ 0.4
CDH11P55287 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CDH11P55287 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH11P55287 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.57■□□□□ 0.4
CDH11P55287 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH11P55287 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.57■□□□□ 0.4
CDH11P55287 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 AL161938.1-201ENST00000569833 2180 ntBASIC17.57■□□□□ 0.4
CDH11P55287 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.57■□□□□ 0.4
CDH11P55287 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CDH11P55287 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDH11P55287 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
CDH11P55287 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH11P55287 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDH11P55287 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDH11P55287 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.56■□□□□ 0.4
CDH11P55287 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms