Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CBX5P45973 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
CBX5P45973 MST1L-201ENST00000442552 2185 ntBASIC16.54■□□□□ 0.24
CBX5P45973 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX5P45973 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX5P45973 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX5P45973 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.54■□□□□ 0.24
CBX5P45973 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CBX5P45973 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CBX5P45973 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.54■□□□□ 0.24
CBX5P45973 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.53■□□□□ 0.24
CBX5P45973 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CBX5P45973 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CBX5P45973 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CBX5P45973 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.53■□□□□ 0.24
CBX5P45973 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CBX5P45973 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.53■□□□□ 0.24
CBX5P45973 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.53■□□□□ 0.24
CBX5P45973 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 AL139246.5-201ENST00000606645 996 ntBASIC16.53■□□□□ 0.24
CBX5P45973 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CBX5P45973 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CBX5P45973 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
CBX5P45973 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.53■□□□□ 0.24
CBX5P45973 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CBX5P45973 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CBX5P45973 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
CBX5P45973 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX5P45973 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CBX5P45973 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CBX5P45973 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CBX5P45973 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CBX5P45973 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX5P45973 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.52■□□□□ 0.24
CBX5P45973 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX5P45973 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX5P45973 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CBX5P45973 AC007322.4-201ENST00000509611 723 ntBASIC16.52■□□□□ 0.24
CBX5P45973 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.52■□□□□ 0.24
CBX5P45973 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.52■□□□□ 0.24
CBX5P45973 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CBX5P45973 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.52■□□□□ 0.24
CBX5P45973 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CBX5P45973 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CBX5P45973 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CBX5P45973 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.52■□□□□ 0.23
CBX5P45973 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CBX5P45973 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CBX5P45973 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CBX5P45973 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CBX5P45973 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CBX5P45973 AL391005.1-201ENST00000623953 2435 ntBASIC16.51■□□□□ 0.23
CBX5P45973 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX5P45973 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX5P45973 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CBX5P45973 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CBX5P45973 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CBX5P45973 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.51■□□□□ 0.23
CBX5P45973 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.51■□□□□ 0.23
CBX5P45973 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CBX5P45973 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 GALNS-213ENST00000569433 723 ntTSL 3 BASIC16.51■□□□□ 0.23
CBX5P45973 AC010536.3-201ENST00000620306 533 ntBASIC16.51■□□□□ 0.23
CBX5P45973 AC105020.6-201ENST00000621523 1217 ntBASIC16.51■□□□□ 0.23
CBX5P45973 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CBX5P45973 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.51■□□□□ 0.23
CBX5P45973 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CBX5P45973 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.5■□□□□ 0.23
CBX5P45973 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CBX5P45973 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CBX5P45973 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.5■□□□□ 0.23
CBX5P45973 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX5P45973 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms