Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 MARS-203ENST00000537638 3592 ntTSL 216.48■□□□□ 0.232e-7■■■■□ 22.5
U2AF2P26368 NARS-201ENST00000256854 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.171e-7■■■■□ 22.5
U2AF2P26368 NARS-204ENST00000586807 1608 ntTSL 213.36□□□□□ -0.271e-7■■■■□ 22.5
U2AF2P26368 NARS-210ENST00000589314 1036 ntTSL 510.23□□□□□ -0.771e-13■■■■□ 22.5
U2AF2P26368 STT3A-216ENST00000534472 1561 ntTSL 1 (best)20.68■□□□□ 0.93e-8■■■■□ 22.5
U2AF2P26368 PDHA1-207ENST00000423505 731 ntTSL 219.98■□□□□ 0.793e-8■■■■□ 22.5
U2AF2P26368 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.24■□□□□ 0.673e-8■■■■□ 22.5
U2AF2P26368 PDHA1-201ENST00000355808 699 ntTSL 316.79■□□□□ 0.283e-8■■■■□ 22.5
U2AF2P26368 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC16.15■□□□□ 0.183e-8■■■■□ 22.5
U2AF2P26368 STT3A-211ENST00000529196 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.043e-8■■■■□ 22.5
U2AF2P26368 FARP2-219ENST00000486736 578 ntTSL 315□□□□□ -0.013e-8■■■■□ 22.5
U2AF2P26368 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.053e-8■■■■□ 22.5
U2AF2P26368 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.053e-8■■■■□ 22.5
U2AF2P26368 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC13.47□□□□□ -0.253e-8■■■■□ 22.5
U2AF2P26368 STT3A-201ENST00000392708 4558 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.583e-8■■■■□ 22.5
U2AF2P26368 FARP2-211ENST00000470617 3273 ntTSL 1 (best)10.11□□□□□ -0.793e-8■■■■□ 22.5
U2AF2P26368 PUM1-218ENST00000526215 586 ntTSL 27.51□□□□□ -1.219e-12■■■■□ 22.5
U2AF2P26368 STT3A-213ENST00000531001 325 ntTSL 37.4□□□□□ -1.223e-8■■■■□ 22.5
U2AF2P26368 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.29□□□□□ -1.243e-8■■■■□ 22.5
U2AF2P26368 STT3A-202ENST00000524639 582 ntTSL 26.22□□□□□ -1.413e-8■■■■□ 22.5
U2AF2P26368 STT3A-208ENST00000526726 582 ntTSL 34□□□□□ -1.773e-8■■■■□ 22.5
U2AF2P26368 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.63■□□□□ 0.733e-7■■■■□ 22.5
U2AF2P26368 EPB41-203ENST00000349460 3029 ntTSL 1 (best) BASIC12.54□□□□□ -0.43e-7■■■■□ 22.5
U2AF2P26368 EPB41-207ENST00000373800 2853 ntTSL 1 (best) BASIC11.9□□□□□ -0.53e-7■■■■□ 22.5
U2AF2P26368 EPB41-206ENST00000373798 5933 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.723e-7■■■■□ 22.5
U2AF2P26368 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC10.42□□□□□ -0.743e-7■■■■□ 22.5
U2AF2P26368 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC10.39□□□□□ -0.753e-7■■■■□ 22.5
U2AF2P26368 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.043e-7■■■■□ 22.5
U2AF2P26368 EPB41-213ENST00000636666 3642 ntTSL 58.02□□□□□ -1.133e-7■■■■□ 22.5
U2AF2P26368 LNPK-210ENST00000483230 252 ntTSL 528.98■■■□□ 2.236e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.856e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC25.27■■□□□ 1.646e-6■■■■□ 22.5
U2AF2P26368 SACM1L-209ENST00000463347 854 ntTSL 225.14■■□□□ 1.626e-6■■■■□ 22.5
U2AF2P26368 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.39■■□□□ 1.496e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-207ENST00000529847 920 ntTSL 224.31■■□□□ 1.486e-6■■■■□ 22.5
U2AF2P26368 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.476e-6■■■■□ 22.5
U2AF2P26368 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC23.38■■□□□ 1.336e-6■■■■□ 22.5
U2AF2P26368 ZNF542P-203ENST00000468396 980 ntTSL 322.37■■□□□ 1.176e-6■■■■□ 22.5
U2AF2P26368 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.178e-11■■■■□ 22.5
U2AF2P26368 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.76■■□□□ 1.078e-11■■■■□ 22.5
U2AF2P26368 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.066e-6■■■■□ 22.5
U2AF2P26368 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.056e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-208ENST00000530410 971 ntTSL 221.39■■□□□ 1.016e-6■■■■□ 22.5
U2AF2P26368 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.953e-7■■■■□ 22.5
U2AF2P26368 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.956e-6■■■■□ 22.5
U2AF2P26368 AC010203.1-204ENST00000548782 407 ntBASIC20.94■□□□□ 0.946e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.92■□□□□ 0.946e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.926e-6■■■■□ 22.5
U2AF2P26368 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC20.69■□□□□ 0.96e-6■■■■□ 22.5
U2AF2P26368 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.27■□□□□ 0.846e-6■■■■□ 22.5
U2AF2P26368 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.817e-7■■■■□ 22.5
U2AF2P26368 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.08■□□□□ 0.816e-6■■■■□ 22.5
U2AF2P26368 L3HYPDH-205ENST00000481608 758 ntTSL 219.58■□□□□ 0.726e-6■■■■□ 22.5
U2AF2P26368 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.58■□□□□ 0.726e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.34■□□□□ 0.696e-6■■■■□ 22.5
U2AF2P26368 YWHAB-207ENST00000631616 5867 ntTSL 1 (best)19.3■□□□□ 0.686e-6■■■■□ 22.5
U2AF2P26368 LSM14A-208ENST00000590416 699 ntTSL 219.04■□□□□ 0.646e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-209ENST00000531037 1560 ntTSL 318.4■□□□□ 0.546e-6■■■■□ 22.5
U2AF2P26368 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.476e-6■■■■□ 22.5
U2AF2P26368 AKAP10-207ENST00000572341 559 ntTSL 417.86■□□□□ 0.456e-6■■■■□ 22.5
U2AF2P26368 AKAP10-208ENST00000576896 565 ntTSL 417.86■□□□□ 0.456e-6■■■■□ 22.5
U2AF2P26368 ENTPD1-AS1-207ENST00000449419 948 ntTSL 317.85■□□□□ 0.456e-6■■■■□ 22.5
U2AF2P26368 LRRFIP2-208ENST00000438374 560 ntTSL 417.74■□□□□ 0.438e-11■■■■□ 22.5
U2AF2P26368 L3HYPDH-207ENST00000527981 1355 ntTSL 217.49■□□□□ 0.396e-6■■■■□ 22.5
U2AF2P26368 AKAP10-206ENST00000572155 578 ntTSL 417.47■□□□□ 0.396e-6■■■■□ 22.5
U2AF2P26368 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.397e-7■■■■□ 22.5
U2AF2P26368 ENTPD1-AS1-201ENST00000414006 591 ntTSL 317.32■□□□□ 0.366e-6■■■■□ 22.5
U2AF2P26368 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.06■□□□□ 0.326e-6■■■■□ 22.5
U2AF2P26368 AKAP10-210ENST00000582611 1319 ntTSL 516.96■□□□□ 0.36e-6■■■■□ 22.5
U2AF2P26368 YWHAB-203ENST00000428262 648 ntTSL 316.87■□□□□ 0.296e-6■■■■□ 22.5
U2AF2P26368 SMAD7-202ENST00000545051 2211 ntTSL 216.82■□□□□ 0.288e-11■■■■□ 22.5
U2AF2P26368 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.266e-6■■■■□ 22.5
U2AF2P26368 MARCH7-205ENST00000421037 559 ntTSL 416.54■□□□□ 0.246e-6■■■■□ 22.5
U2AF2P26368 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.26e-6■■■■□ 22.5
U2AF2P26368 FNTB-206ENST00000555742 725 ntTSL 516.32■□□□□ 0.26e-6■■■■□ 22.5
U2AF2P26368 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.28e-11■■■■□ 22.5
U2AF2P26368 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.176e-6■■■■□ 22.5
U2AF2P26368 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.11■□□□□ 0.178e-11■■■■□ 22.5
U2AF2P26368 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.11■□□□□ 0.178e-11■■■■□ 22.5
U2AF2P26368 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.11■□□□□ 0.178e-11■■■■□ 22.5
U2AF2P26368 KDM5B-201ENST00000235790 4418 ntTSL 215.96■□□□□ 0.156e-6■■■■□ 22.5
U2AF2P26368 DTNB-219ENST00000485845 1988 ntTSL 515.93■□□□□ 0.148e-11■■■■□ 22.5
U2AF2P26368 SMARCE1-209ENST00000478349 1090 ntTSL 515.92■□□□□ 0.148e-11■■■■□ 22.5
U2AF2P26368 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.136e-6■■■■□ 22.5
U2AF2P26368 TMBIM6-224ENST00000551154 423 ntTSL 215.81■□□□□ 0.126e-6■■■■□ 22.5
U2AF2P26368 CSNK2B-205ENST00000465481 579 ntTSL 1 (best)15.76■□□□□ 0.116e-6■■■■□ 22.5
U2AF2P26368 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.71■□□□□ 0.16e-6■■■■□ 22.5
U2AF2P26368 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC15.67■□□□□ 0.16e-6■■■■□ 22.5
U2AF2P26368 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.65■□□□□ 0.18e-11■■■■□ 22.5
U2AF2P26368 CHURC1-FNTB-203ENST00000552941 1847 ntTSL 215.62■□□□□ 0.096e-6■■■■□ 22.5
U2AF2P26368 TMBIM6-223ENST00000550951 533 ntTSL 315.5■□□□□ 0.076e-6■■■■□ 22.5
U2AF2P26368 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.056e-6■■■■□ 22.5
U2AF2P26368 GTF2F2-201ENST00000340473 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.056e-6■■■■□ 22.5
U2AF2P26368 MINK1-212ENST00000576037 770 ntTSL 215.14■□□□□ 0.016e-6■■■■□ 22.5
U2AF2P26368 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.016e-6■■■■□ 22.5
U2AF2P26368 SMAD7-203ENST00000585986 563 ntTSL 415.11■□□□□ 0.018e-11■■■■□ 22.5
U2AF2P26368 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC15.11■□□□□ 0.018e-11■■■■□ 22.5
U2AF2P26368 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC15.01□□□□□ -0.016e-6■■■■□ 22.5
U2AF2P26368 PEX19-208ENST00000532508 1237 ntTSL 514.96□□□□□ -0.016e-6■■■■□ 22.5
U2AF2P26368 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.036e-6■■■■□ 22.5
Retrieved 100 of 36,523 protein–RNA pairs in 330.8 ms