RNA–Protein interactions for RNA: ENST00000590416.1

LSM14A-208, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2

Gene LSM14A, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-208ENST00000590416 NISCHQ9Y2I1 1504 aa40.22■■■■■ 4.03
LSM14A-208ENST00000590416 CCDC180Q9P1Z9 1646 aa35.68■■■■□ 3.3
LSM14A-208ENST00000590416 ABCC9O60706 1549 aa34.7■■■■□ 3.14
LSM14A-208ENST00000590416 DCAF8L2P0C7V8 631 aa33.66■■■□□ 2.98
LSM14A-208ENST00000590416 ZCCHC6Q5VYS8 1495 aaKnown RBP33.56■■■□□ 2.96
LSM14A-208ENST00000590416 RB1CC1Q8TDY2 1594 aa33.47■■■□□ 2.95
LSM14A-208ENST00000590416 NACADO15069 1562 aa33.46■■■□□ 2.95
LSM14A-208ENST00000590416 MYO15BQ96JP2 1530 aa33.27■■■□□ 2.92
LSM14A-208ENST00000590416 DCAF1Q9Y4B6 1507 aa33.24■■■□□ 2.91
LSM14A-208ENST00000590416 UNC13AQ9UPW8 1703 aa32.76■■■□□ 2.83
LSM14A-208ENST00000590416 SCRIBQ14160 1630 aa32.66■■■□□ 2.82
LSM14A-208ENST00000590416 PABPN1Q86U42 306 aaKnown RBP eCLIP32.47■■■□□ 2.79
LSM14A-208ENST00000590416 BICRAQ9NZM4 1560 aa32.39■■■□□ 2.78
LSM14A-208ENST00000590416 SHROOM4Q9ULL8 1493 aa32.07■■■□□ 2.72
LSM14A-208ENST00000590416 EIF4G1Q04637 1599 aaKnown RBP31.56■■■□□ 2.64
LSM14A-208ENST00000590416 DNAJC5BQ9UF47 199 aa31.51■■■□□ 2.63
LSM14A-208ENST00000590416 CC2D2AQ9P2K1 1620 aa31.38■■■□□ 2.61
LSM14A-208ENST00000590416 CECR2Q9BXF3 1484 aa31.32■■■□□ 2.6
LSM14A-208ENST00000590416 SMARCA4P51532 1647 aa31.2■■■□□ 2.59
LSM14A-208ENST00000590416 BAZ1AQ9NRL2 1556 aaPredicted RBP31.19■■■□□ 2.58
LSM14A-208ENST00000590416 MROH2BQ7Z745 1585 aa31.02■■■□□ 2.56
LSM14A-208ENST00000590416 SMARCA2P51531 1590 aa30.93■■■□□ 2.54
LSM14A-208ENST00000590416 ATAD2BQ9ULI0 1458 aa30.91■■■□□ 2.54
LSM14A-208ENST00000590416 NCAPD3P42695 1498 aa30.82■■■□□ 2.52
LSM14A-208ENST00000590416 PEG3Q9GZU2 1588 aa30.81■■■□□ 2.52
LSM14A-208ENST00000590416 WIZO95785 1651 aa30.76■■■□□ 2.51
LSM14A-208ENST00000590416 HMGXB3Q12766 1538 aa30.74■■■□□ 2.51
LSM14A-208ENST00000590416 BAZ1BQ9UIG0 1483 aaKnown RBP30.74■■■□□ 2.51
LSM14A-208ENST00000590416 RSF1Q96T23 1441 aaPredicted RBP30.73■■■□□ 2.51
LSM14A-208ENST00000590416 TOP2AP11388 1531 aaKnown RBP30.41■■■□□ 2.46
LSM14A-208ENST00000590416 SUPT5HO00267 1087 aaKnown RBP30.3■■■□□ 2.44
LSM14A-208ENST00000590416 NESP48681 1621 aa30.08■■■□□ 2.41
LSM14A-208ENST00000590416 LAMC3Q9Y6N6 1575 aa30.04■■■□□ 2.4
LSM14A-208ENST00000590416 CCDC88BA6NC98 1476 aa30.04■■■□□ 2.4
LSM14A-208ENST00000590416 CADPSQ9ULU8 1353 aa29.98■■■□□ 2.39
LSM14A-208ENST00000590416 ERCC6Q03468 1493 aa29.93■■■□□ 2.38
LSM14A-208ENST00000590416 CFTRP13569 1480 aa29.84■■■□□ 2.37
LSM14A-208ENST00000590416 PDS5BQ9NTI5 1447 aa29.83■■■□□ 2.37
LSM14A-208ENST00000590416 KIF21AQ7Z4S6 1674 aa29.79■■■□□ 2.36
LSM14A-208ENST00000590416 PRDM2Q13029 1718 aa29.76■■■□□ 2.36
LSM14A-208ENST00000590416 FANCD2Q9BXW9 1451 aa29.68■■■□□ 2.34
LSM14A-208ENST00000590416 CEP164Q9UPV0 1460 aa29.63■■■□□ 2.33
LSM14A-208ENST00000590416 THOC2Q8NI27 1593 aaKnown RBP29.57■■■□□ 2.32
LSM14A-208ENST00000590416 MRC2Q9UBG0 1479 aa29.52■■■□□ 2.32
LSM14A-208ENST00000590416 CUX2O14529 1486 aa29.43■■■□□ 2.3
LSM14A-208ENST00000590416 WDR62O43379 1518 aa29.39■■■□□ 2.3
LSM14A-208ENST00000590416 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
LSM14A-208ENST00000590416 DNMBPQ6XZF7 1577 aa29.23■■■□□ 2.27
LSM14A-208ENST00000590416 TOPBP1Q92547 1522 aa29.22■■■□□ 2.27
LSM14A-208ENST00000590416 ABCC8Q09428 1581 aa29.22■■■□□ 2.27
LSM14A-208ENST00000590416 CUX1P39880 1505 aa29.1■■■□□ 2.25
LSM14A-208ENST00000590416 WRNQ14191 1432 aaPredicted RBP eCLIP29.03■■■□□ 2.24
LSM14A-208ENST00000590416 POLA1P09884 1462 aaPredicted RBP28.98■■■□□ 2.23
LSM14A-208ENST00000590416 FGD5Q6ZNL6 1462 aa28.98■■■□□ 2.23
LSM14A-208ENST00000590416 IFT140Q96RY7 1462 aa28.97■■■□□ 2.23
LSM14A-208ENST00000590416 SYNJ1O43426 1573 aa28.95■■■□□ 2.22
LSM14A-208ENST00000590416 BIVM-ERCC5R4GMW8 1640 aa28.94■■■□□ 2.22
LSM14A-208ENST00000590416 TOP2BQ02880 1626 aa28.92■■■□□ 2.22
LSM14A-208ENST00000590416 SOGA1O94964 1423 aa28.88■■■□□ 2.21
LSM14A-208ENST00000590416 RAD54L2Q9Y4B4 1467 aa28.88■■■□□ 2.21
LSM14A-208ENST00000590416 TARBP1Q13395 1621 aaKnown RBP28.87■■■□□ 2.21
LSM14A-208ENST00000590416 ZNF608Q9ULD9 1512 aaPredicted RBP28.81■■■□□ 2.2
LSM14A-208ENST00000590416 EIF4G3O43432 1585 aaKnown RBP28.75■■■□□ 2.19
LSM14A-208ENST00000590416 WDR97A6NE52 1622 aa28.73■■■□□ 2.19
LSM14A-208ENST00000590416 AQRO60306 1485 aaKnown RBP eCLIP28.7■■■□□ 2.18
LSM14A-208ENST00000590416 TDRD9Q8NDG6 1382 aaKnown RBP28.69■■■□□ 2.18
LSM14A-208ENST00000590416 ABCA10Q8WWZ4 1543 aa28.68■■■□□ 2.18
LSM14A-208ENST00000590416 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
LSM14A-208ENST00000590416 GAPVD1Q14C86 1478 aa28.57■■■□□ 2.16
LSM14A-208ENST00000590416 PBRM1Q86U86 1689 aa28.56■■■□□ 2.16
LSM14A-208ENST00000590416 ABCA5Q8WWZ7 1642 aa28.56■■■□□ 2.16
LSM14A-208ENST00000590416 GRIN2BQ13224 1484 aa28.51■■■□□ 2.15
LSM14A-208ENST00000590416 SNAPC4Q5SXM2 1469 aa28.47■■■□□ 2.15
LSM14A-208ENST00000590416 MAGI1Q96QZ7 1491 aaPredicted RBP28.4■■■□□ 2.14
LSM14A-208ENST00000590416 FBLN2P98095 1184 aa28.4■■■□□ 2.14
LSM14A-208ENST00000590416 KIF27Q86VH2 1401 aa28.4■■■□□ 2.14
LSM14A-208ENST00000590416 CHD1O14646 1710 aa28.39■■■□□ 2.14
LSM14A-208ENST00000590416 ERICH3Q5RHP9 1530 aa28.35■■■□□ 2.13
LSM14A-208ENST00000590416 CHIC1Q5VXU3 224 aa28.34■■■□□ 2.13
LSM14A-208ENST00000590416 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
LSM14A-208ENST00000590416 ADAMTS12P58397 1594 aa28.29■■■□□ 2.12
LSM14A-208ENST00000590416 SYNJ2O15056 1496 aa28.29■■■□□ 2.12
LSM14A-208ENST00000590416 OSCARQ8IYS5 282 aa28.28■■■□□ 2.12
LSM14A-208ENST00000590416 FHAD1B1AJZ9 1412 aa28.23■■■□□ 2.11
LSM14A-208ENST00000590416 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
LSM14A-208ENST00000590416 CUL7Q14999 1698 aa28.19■■■□□ 2.1
LSM14A-208ENST00000590416 IGF1RP08069 1367 aa28.19■■■□□ 2.1
LSM14A-208ENST00000590416 DNAJC5Q9H3Z4 198 aa28.17■■■□□ 2.1
LSM14A-208ENST00000590416 GRIN2AQ12879 1464 aa28.15■■■□□ 2.1
LSM14A-208ENST00000590416 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
LSM14A-208ENST00000590416 FAM9AQ8IZU1 332 aaPredicted RBP28.03■■■□□ 2.08
LSM14A-208ENST00000590416 EEA1Q15075 1411 aa28.01■■■□□ 2.08
LSM14A-208ENST00000590416 CEP170Q5SW79 1584 aa28.01■■■□□ 2.07
LSM14A-208ENST00000590416 CLASP1Q7Z460 1538 aa27.98■■■□□ 2.07
LSM14A-208ENST00000590416 NUP160Q12769 1436 aa27.97■■■□□ 2.07
LSM14A-208ENST00000590416 RAPGEF2Q9Y4G8 1499 aa27.95■■■□□ 2.07
LSM14A-208ENST00000590416 CSRNP3Q8WYN3 585 aa27.95■■■□□ 2.06
LSM14A-208ENST00000590416 PRXQ9BXM0 1461 aa27.86■■■□□ 2.05
LSM14A-208ENST00000590416 RIMBP3CA6NJZ7 1639 aa27.83■■■□□ 2.05
LSM14A-208ENST00000590416 RIMBP3BA6NNM3 1639 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms