RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 NISCHQ9Y2I1 1504 aa30.03■■■□□ 2.4
SMAD7-202ENST00000545051 CCDC180Q9P1Z9 1646 aa26.65■■□□□ 1.86
SMAD7-202ENST00000545051 ABCC9O60706 1549 aa25.8■■□□□ 1.72
SMAD7-202ENST00000545051 ZCCHC6Q5VYS8 1495 aaKnown RBP25.06■■□□□ 1.6
SMAD7-202ENST00000545051 DCAF8L2P0C7V8 631 aa25.01■■□□□ 1.59
SMAD7-202ENST00000545051 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
SMAD7-202ENST00000545051 NACADO15069 1562 aa24.99■■□□□ 1.59
SMAD7-202ENST00000545051 RB1CC1Q8TDY2 1594 aa24.98■■□□□ 1.59
SMAD7-202ENST00000545051 MYO15BQ96JP2 1530 aa24.92■■□□□ 1.58
SMAD7-202ENST00000545051 DCAF1Q9Y4B6 1507 aa24.89■■□□□ 1.57
SMAD7-202ENST00000545051 SUPT5HO00267 1087 aaKnown RBP24.61■■□□□ 1.53
SMAD7-202ENST00000545051 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
SMAD7-202ENST00000545051 SCRIBQ14160 1630 aa24.29■■□□□ 1.48
SMAD7-202ENST00000545051 BICRAQ9NZM4 1560 aa24.14■■□□□ 1.45
SMAD7-202ENST00000545051 PABPN1Q86U42 306 aaKnown RBP eCLIP24.13■■□□□ 1.45
SMAD7-202ENST00000545051 CHIC1Q5VXU3 224 aa24.1■■□□□ 1.45
SMAD7-202ENST00000545051 HRCP23327 699 aa23.79■■□□□ 1.4
SMAD7-202ENST00000545051 PCGF6Q9BYE7 350 aa23.53■■□□□ 1.36
SMAD7-202ENST00000545051 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
SMAD7-202ENST00000545051 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
SMAD7-202ENST00000545051 CC2D2AQ9P2K1 1620 aa23.36■■□□□ 1.33
SMAD7-202ENST00000545051 CECR2Q9BXF3 1484 aa23.33■■□□□ 1.33
SMAD7-202ENST00000545051 BAZ1AQ9NRL2 1556 aaPredicted RBP23.3■■□□□ 1.32
SMAD7-202ENST00000545051 LOC105371045A0A1W2PR82 267 aa23.29■■□□□ 1.32
SMAD7-202ENST00000545051 RSF1Q96T23 1441 aaPredicted RBP23.28■■□□□ 1.32
SMAD7-202ENST00000545051 SMARCA4P51532 1647 aa23.27■■□□□ 1.32
SMAD7-202ENST00000545051 TRIM26Q12899 539 aaPredicted RBP23.14■■□□□ 1.3
SMAD7-202ENST00000545051 MROH2BQ7Z745 1585 aa23.12■■□□□ 1.29
SMAD7-202ENST00000545051 PPARGC1BQ86YN6 1023 aaKnown RBP23.11■■□□□ 1.29
SMAD7-202ENST00000545051 SMARCA2P51531 1590 aa23.1■■□□□ 1.29
SMAD7-202ENST00000545051 ATAD2BQ9ULI0 1458 aa23.07■■□□□ 1.28
SMAD7-202ENST00000545051 PEG3Q9GZU2 1588 aa23.04■■□□□ 1.28
SMAD7-202ENST00000545051 NCAPD3P42695 1498 aa23.03■■□□□ 1.28
SMAD7-202ENST00000545051 TRIM41Q8WV44 630 aa22.97■■□□□ 1.27
SMAD7-202ENST00000545051 HMGXB3Q12766 1538 aa22.96■■□□□ 1.27
SMAD7-202ENST00000545051 BAZ1BQ9UIG0 1483 aaKnown RBP22.92■■□□□ 1.26
SMAD7-202ENST00000545051 WIZO95785 1651 aa22.9■■□□□ 1.26
SMAD7-202ENST00000545051 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
SMAD7-202ENST00000545051 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
SMAD7-202ENST00000545051 FAM9AQ8IZU1 332 aaPredicted RBP22.69■■□□□ 1.22
SMAD7-202ENST00000545051 LAMC3Q9Y6N6 1575 aa22.42■■□□□ 1.18
SMAD7-202ENST00000545051 EHMT2Q96KQ7 1210 aa22.42■■□□□ 1.18
SMAD7-202ENST00000545051 CCDC88BA6NC98 1476 aa22.4■■□□□ 1.18
SMAD7-202ENST00000545051 CADPSQ9ULU8 1353 aa22.38■■□□□ 1.17
SMAD7-202ENST00000545051 NESP48681 1621 aa22.37■■□□□ 1.17
SMAD7-202ENST00000545051 CFTRP13569 1480 aa22.29■■□□□ 1.16
SMAD7-202ENST00000545051 ABCC8Q09428 1581 aa22.27■■□□□ 1.16
SMAD7-202ENST00000545051 ERCC6Q03468 1493 aa22.27■■□□□ 1.16
SMAD7-202ENST00000545051 PDS5BQ9NTI5 1447 aa22.27■■□□□ 1.16
SMAD7-202ENST00000545051 WRNQ14191 1432 aaPredicted RBP eCLIP22.23■■□□□ 1.15
SMAD7-202ENST00000545051 PRDM2Q13029 1718 aa22.19■■□□□ 1.14
SMAD7-202ENST00000545051 EEA1Q15075 1411 aa22.15■■□□□ 1.14
SMAD7-202ENST00000545051 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
SMAD7-202ENST00000545051 CEP162Q5TB80 1403 aa22.12■■□□□ 1.13
SMAD7-202ENST00000545051 FANCD2Q9BXW9 1451 aa22.12■■□□□ 1.13
SMAD7-202ENST00000545051 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
SMAD7-202ENST00000545051 TNIKQ9UKE5 1360 aa22.09■■□□□ 1.13
SMAD7-202ENST00000545051 CCER1Q8TC90 406 aaPredicted RBP22.08■■□□□ 1.13
SMAD7-202ENST00000545051 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.06■■□□□ 1.12
SMAD7-202ENST00000545051 SOGA1O94964 1423 aa22.05■■□□□ 1.12
SMAD7-202ENST00000545051 THOC2Q8NI27 1593 aaKnown RBP22.02■■□□□ 1.11
SMAD7-202ENST00000545051 MRC2Q9UBG0 1479 aa22.01■■□□□ 1.11
SMAD7-202ENST00000545051 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
SMAD7-202ENST00000545051 SCAF1Q9H7N4 1312 aaKnown RBP22■■□□□ 1.11
SMAD7-202ENST00000545051 GOLGA3Q08378 1498 aa21.97■■□□□ 1.11
SMAD7-202ENST00000545051 CUX2O14529 1486 aa21.95■■□□□ 1.1
SMAD7-202ENST00000545051 CSRNP3Q8WYN3 585 aa21.94■■□□□ 1.1
SMAD7-202ENST00000545051 WDR62O43379 1518 aa21.92■■□□□ 1.1
SMAD7-202ENST00000545051 RUSC2Q8N2Y8 1516 aa21.91■■□□□ 1.1
SMAD7-202ENST00000545051 KIF21BO75037 1637 aa21.87■■□□□ 1.09
SMAD7-202ENST00000545051 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
SMAD7-202ENST00000545051 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
SMAD7-202ENST00000545051 SYNJ1O43426 1573 aa21.81■■□□□ 1.08
SMAD7-202ENST00000545051 DNMBPQ6XZF7 1577 aa21.81■■□□□ 1.08
SMAD7-202ENST00000545051 TTBK1Q5TCY1 1321 aaPredicted RBP21.8■■□□□ 1.08
SMAD7-202ENST00000545051 TOPBP1Q92547 1522 aa21.79■■□□□ 1.08
SMAD7-202ENST00000545051 DIEXFQ68CQ4 756 aaKnown RBP21.79■■□□□ 1.08
SMAD7-202ENST00000545051 ACIN1Q9UKV3 1341 aaKnown RBP21.78■■□□□ 1.08
SMAD7-202ENST00000545051 CUX1P39880 1505 aa21.69■■□□□ 1.06
SMAD7-202ENST00000545051 CENPBP07199 599 aaPredicted RBP21.68■■□□□ 1.06
SMAD7-202ENST00000545051 CLIP1P30622 1438 aa21.66■■□□□ 1.06
SMAD7-202ENST00000545051 NEUROD1Q13562 356 aa21.66■■□□□ 1.06
SMAD7-202ENST00000545051 VPS8Q8N3P4 1428 aa21.64■■□□□ 1.06
SMAD7-202ENST00000545051 IFT140Q96RY7 1462 aa21.63■■□□□ 1.05
SMAD7-202ENST00000545051 POLA1P09884 1462 aaPredicted RBP21.61■■□□□ 1.05
SMAD7-202ENST00000545051 FGD5Q6ZNL6 1462 aa21.6■■□□□ 1.05
SMAD7-202ENST00000545051 BIVM-ERCC5R4GMW8 1640 aa21.6■■□□□ 1.05
SMAD7-202ENST00000545051 ZNF316A6NFI3 1004 aaPredicted RBP21.6■■□□□ 1.05
SMAD7-202ENST00000545051 TOP2BQ02880 1626 aa21.59■■□□□ 1.05
SMAD7-202ENST00000545051 RAPGEF2Q9Y4G8 1499 aa21.54■■□□□ 1.04
SMAD7-202ENST00000545051 TARBP1Q13395 1621 aaKnown RBP21.52■■□□□ 1.04
SMAD7-202ENST00000545051 RAD54L2Q9Y4B4 1467 aa21.5■■□□□ 1.03
SMAD7-202ENST00000545051 GTF3C3Q9Y5Q9 886 aa21.48■■□□□ 1.03
SMAD7-202ENST00000545051 ERICH3Q5RHP9 1530 aa21.47■■□□□ 1.03
SMAD7-202ENST00000545051 APLP2Q06481 763 aa21.47■■□□□ 1.03
SMAD7-202ENST00000545051 HNRNPUL2Q1KMD3 747 aaKnown RBP21.45■■□□□ 1.02
SMAD7-202ENST00000545051 WDR97A6NE52 1622 aa21.44■■□□□ 1.02
SMAD7-202ENST00000545051 ZNF608Q9ULD9 1512 aaPredicted RBP21.44■■□□□ 1.02
SMAD7-202ENST00000545051 ABCA10Q8WWZ4 1543 aa21.41■■□□□ 1.02
SMAD7-202ENST00000545051 EIF4G3O43432 1585 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms