RNA–Protein interactions for RNA: ENST00000470617.1

FARP2-211, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 2, humanhuman

TSL 1 (best)

Gene FARP2, Length 3,273 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP2-211ENST00000470617 NISCHQ9Y2I1 1504 aa16.15■□□□□ 0.18
FARP2-211ENST00000470617 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
FARP2-211ENST00000470617 PELP1Q8IZL8 1130 aaKnown RBP14.16□□□□□ -0.14
FARP2-211ENST00000470617 SUPT5HO00267 1087 aaKnown RBP13.96□□□□□ -0.17
FARP2-211ENST00000470617 PPARGC1BQ86YN6 1023 aaKnown RBP13.96□□□□□ -0.18
FARP2-211ENST00000470617 DCAF8L2P0C7V8 631 aa13.9□□□□□ -0.18
FARP2-211ENST00000470617 HRCP23327 699 aa13.89□□□□□ -0.19
FARP2-211ENST00000470617 MYT1Q01538 1121 aa13.78□□□□□ -0.2
FARP2-211ENST00000470617 PCGF6Q9BYE7 350 aa13.77□□□□□ -0.21
FARP2-211ENST00000470617 CHIC1Q5VXU3 224 aa13.73□□□□□ -0.21
FARP2-211ENST00000470617 ZCCHC6Q5VYS8 1495 aaKnown RBP13.62□□□□□ -0.23
FARP2-211ENST00000470617 CCDC180Q9P1Z9 1646 aa13.54□□□□□ -0.24
FARP2-211ENST00000470617 MYO15BQ96JP2 1530 aa13.34□□□□□ -0.27
FARP2-211ENST00000470617 SCAF1Q9H7N4 1312 aaKnown RBP13.34□□□□□ -0.27
FARP2-211ENST00000470617 LOC105371045A0A1W2PR82 267 aa13.21□□□□□ -0.29
FARP2-211ENST00000470617 EHMT2Q96KQ7 1210 aa13.21□□□□□ -0.3
FARP2-211ENST00000470617 AEBP2Q6ZN18 517 aaPredicted RBP13.05□□□□□ -0.32
FARP2-211ENST00000470617 DCAF1Q9Y4B6 1507 aa13.05□□□□□ -0.32
FARP2-211ENST00000470617 ZEB1P37275 1124 aaPredicted RBP13.02□□□□□ -0.33
FARP2-211ENST00000470617 SCRIBQ14160 1630 aa13.01□□□□□ -0.33
FARP2-211ENST00000470617 TTBK1Q5TCY1 1321 aaPredicted RBP13□□□□□ -0.33
FARP2-211ENST00000470617 FAM9AQ8IZU1 332 aaPredicted RBP12.97□□□□□ -0.33
FARP2-211ENST00000470617 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
FARP2-211ENST00000470617 ABCC9O60706 1549 aa12.93□□□□□ -0.34
FARP2-211ENST00000470617 TRIM26Q12899 539 aaPredicted RBP12.91□□□□□ -0.34
FARP2-211ENST00000470617 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
FARP2-211ENST00000470617 NEUROD1Q13562 356 aa12.9□□□□□ -0.34
FARP2-211ENST00000470617 CENPBP07199 599 aaPredicted RBP12.87□□□□□ -0.35
FARP2-211ENST00000470617 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
FARP2-211ENST00000470617 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
FARP2-211ENST00000470617 YTHDC1Q96MU7 727 aaKnown RBP12.84□□□□□ -0.35
FARP2-211ENST00000470617 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.37
FARP2-211ENST00000470617 SLC24A1O60721 1099 aa12.77□□□□□ -0.37
FARP2-211ENST00000470617 CECR2Q9BXF3 1484 aa12.75□□□□□ -0.37
FARP2-211ENST00000470617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.72□□□□□ -0.37
FARP2-211ENST00000470617 BCL11AQ9H165 835 aa12.72□□□□□ -0.37
FARP2-211ENST00000470617 MROH2BQ7Z745 1585 aa12.65□□□□□ -0.38
FARP2-211ENST00000470617 CCER1Q8TC90 406 aaPredicted RBP12.6□□□□□ -0.39
FARP2-211ENST00000470617 WIZO95785 1651 aa12.59□□□□□ -0.39
FARP2-211ENST00000470617 NACADO15069 1562 aa12.59□□□□□ -0.39
FARP2-211ENST00000470617 DIEXFQ68CQ4 756 aaKnown RBP12.56□□□□□ -0.4
FARP2-211ENST00000470617 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
FARP2-211ENST00000470617 PRKCSHP14314 528 aaPredicted RBP12.47□□□□□ -0.41
FARP2-211ENST00000470617 ANP32EQ9BTT0 268 aa12.47□□□□□ -0.41
FARP2-211ENST00000470617 ABCC8Q09428 1581 aa12.4□□□□□ -0.42
FARP2-211ENST00000470617 PHF23Q9BUL5 403 aaPredicted RBP12.38□□□□□ -0.43
FARP2-211ENST00000470617 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
FARP2-211ENST00000470617 ERICH6Q7L0X2 663 aa12.36□□□□□ -0.43
FARP2-211ENST00000470617 CCDC88BA6NC98 1476 aa12.34□□□□□ -0.43
FARP2-211ENST00000470617 UBTFP17480 764 aaKnown RBP12.33□□□□□ -0.44
FARP2-211ENST00000470617 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
FARP2-211ENST00000470617 SOGA1O94964 1423 aa12.3□□□□□ -0.44
FARP2-211ENST00000470617 RANGAP1P46060 587 aaPredicted RBP12.29□□□□□ -0.44
FARP2-211ENST00000470617 MIER1Q8N108 512 aa12.29□□□□□ -0.44
FARP2-211ENST00000470617 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
FARP2-211ENST00000470617 BCANQ96GW7 911 aa12.28□□□□□ -0.44
FARP2-211ENST00000470617 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
FARP2-211ENST00000470617 UNC13AQ9UPW8 1703 aa12.27□□□□□ -0.45
FARP2-211ENST00000470617 RUSC2Q8N2Y8 1516 aa12.25□□□□□ -0.45
FARP2-211ENST00000470617 SMARCA2P51531 1590 aa12.25□□□□□ -0.45
FARP2-211ENST00000470617 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
FARP2-211ENST00000470617 CEP162Q5TB80 1403 aa12.2□□□□□ -0.46
FARP2-211ENST00000470617 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
FARP2-211ENST00000470617 TSHZ2Q9NRE2 1034 aa12.17□□□□□ -0.46
FARP2-211ENST00000470617 CLSPNQ9HAW4 1339 aa12.16□□□□□ -0.46
FARP2-211ENST00000470617 HNRNPUL2Q1KMD3 747 aaKnown RBP12.14□□□□□ -0.47
FARP2-211ENST00000470617 SUPT16HQ9Y5B9 1047 aaKnown RBP12.13□□□□□ -0.47
FARP2-211ENST00000470617 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
FARP2-211ENST00000470617 WRNQ14191 1432 aaPredicted RBP eCLIP12.11□□□□□ -0.47
FARP2-211ENST00000470617 TNIKQ9UKE5 1360 aa12.1□□□□□ -0.47
FARP2-211ENST00000470617 APLP2Q06481 763 aa12.04□□□□□ -0.48
FARP2-211ENST00000470617 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
FARP2-211ENST00000470617 SYNJ1O43426 1573 aa12.02□□□□□ -0.48
FARP2-211ENST00000470617 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.49
FARP2-211ENST00000470617 ATAD2BQ9ULI0 1458 aa12.01□□□□□ -0.49
FARP2-211ENST00000470617 ITGAEP38570 1179 aa12.01□□□□□ -0.49
FARP2-211ENST00000470617 EEA1Q15075 1411 aa12□□□□□ -0.49
FARP2-211ENST00000470617 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
FARP2-211ENST00000470617 CLIP1P30622 1438 aa11.98□□□□□ -0.49
FARP2-211ENST00000470617 KCNH8Q96L42 1107 aa11.96□□□□□ -0.5
FARP2-211ENST00000470617 RAPGEF2Q9Y4G8 1499 aa11.95□□□□□ -0.5
FARP2-211ENST00000470617 CEP164Q9UPV0 1460 aa11.95□□□□□ -0.5
FARP2-211ENST00000470617 PEG3Q9GZU2 1588 aa11.9□□□□□ -0.5
FARP2-211ENST00000470617 FKBP8Q14318 412 aa11.89□□□□□ -0.51
FARP2-211ENST00000470617 RBM19Q9Y4C8 960 aaKnown RBP11.89□□□□□ -0.51
FARP2-211ENST00000470617 ANO8Q9HCE9 1232 aaPredicted RBP11.87□□□□□ -0.51
FARP2-211ENST00000470617 VPS8Q8N3P4 1428 aa11.86□□□□□ -0.51
FARP2-211ENST00000470617 RTN4Q9NQC3 1192 aaKnown RBP11.85□□□□□ -0.51
FARP2-211ENST00000470617 MYT1LQ9UL68 1186 aa11.85□□□□□ -0.51
FARP2-211ENST00000470617 KIF21BO75037 1637 aa11.84□□□□□ -0.51
FARP2-211ENST00000470617 KANK4Q5T7N3 995 aaPredicted RBP11.84□□□□□ -0.51
FARP2-211ENST00000470617 NEFLP07196 543 aa11.82□□□□□ -0.52
FARP2-211ENST00000470617 IRX6P78412 446 aaPredicted RBP11.81□□□□□ -0.52
FARP2-211ENST00000470617 DEKP35659 375 aaKnown RBP11.78□□□□□ -0.52
FARP2-211ENST00000470617 TOP2BQ02880 1626 aa11.78□□□□□ -0.52
FARP2-211ENST00000470617 TRIM52Q96A61 297 aa11.78□□□□□ -0.52
FARP2-211ENST00000470617 HIRIP3Q9BW71 556 aaPredicted RBP11.77□□□□□ -0.52
FARP2-211ENST00000470617 ATP1B4Q9UN42 357 aaPredicted RBP11.77□□□□□ -0.52
FARP2-211ENST00000470617 P3H3Q8IVL6 736 aa11.75□□□□□ -0.53
FARP2-211ENST00000470617 CUX1P39880 1505 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms