Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PEX1O43933 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PEX1O43933 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.7■□□□□ 0.58
PEX1O43933 NOC2LP2-201ENST00000407594 1944 ntBASIC18.7■□□□□ 0.58
PEX1O43933 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.7■□□□□ 0.58
PEX1O43933 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.7■□□□□ 0.58
PEX1O43933 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PEX1O43933 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
PEX1O43933 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.7■□□□□ 0.58
PEX1O43933 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.7■□□□□ 0.58
PEX1O43933 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PEX1O43933 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.7■□□□□ 0.58
PEX1O43933 UNC93B5-201ENST00000530315 699 ntBASIC18.7■□□□□ 0.58
PEX1O43933 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PEX1O43933 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.7■□□□□ 0.58
PEX1O43933 AC105020.6-201ENST00000621523 1217 ntBASIC18.7■□□□□ 0.58
PEX1O43933 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PEX1O43933 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.69■□□□□ 0.58
PEX1O43933 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX1O43933 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX1O43933 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX1O43933 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX1O43933 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.69■□□□□ 0.58
PEX1O43933 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.69■□□□□ 0.58
PEX1O43933 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.69■□□□□ 0.58
PEX1O43933 AC060766.5-201ENST00000590539 871 ntBASIC18.69■□□□□ 0.58
PEX1O43933 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.69■□□□□ 0.58
PEX1O43933 HLA-B-256ENST00000639848 1089 ntBASIC18.69■□□□□ 0.58
PEX1O43933 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PEX1O43933 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PEX1O43933 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.69■□□□□ 0.58
PEX1O43933 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PEX1O43933 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PEX1O43933 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PEX1O43933 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX1O43933 AC009237.14-201ENST00000609975 1594 ntBASIC18.68■□□□□ 0.58
PEX1O43933 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX1O43933 HCG11-201ENST00000411553 5696 ntBASIC18.68■□□□□ 0.58
PEX1O43933 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.68■□□□□ 0.58
PEX1O43933 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.68■□□□□ 0.58
PEX1O43933 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PEX1O43933 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PEX1O43933 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PEX1O43933 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX1O43933 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.67■□□□□ 0.58
PEX1O43933 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX1O43933 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.67■□□□□ 0.58
PEX1O43933 AC087633.2-202ENST00000565166 1439 ntBASIC18.67■□□□□ 0.58
PEX1O43933 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PEX1O43933 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX1O43933 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PEX1O43933 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PEX1O43933 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
PEX1O43933 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PEX1O43933 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PEX1O43933 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.67■□□□□ 0.58
PEX1O43933 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms