Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 AC096631.2-201ENST00000436136 790 ntBASIC18.65■□□□□ 0.58
NDE1Q9NXR1 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 AL136967.2-201ENST00000623968 743 ntBASIC18.65■□□□□ 0.58
NDE1Q9NXR1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
NDE1Q9NXR1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NDE1Q9NXR1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
NDE1Q9NXR1 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
NDE1Q9NXR1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NDE1Q9NXR1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NDE1Q9NXR1 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
NDE1Q9NXR1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NDE1Q9NXR1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 AC027612.3-201ENST00000413684 1047 ntBASIC18.64■□□□□ 0.57
NDE1Q9NXR1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NDE1Q9NXR1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 AL591742.1-201ENST00000604433 565 ntBASIC18.63■□□□□ 0.57
NDE1Q9NXR1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.63■□□□□ 0.57
NDE1Q9NXR1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
NDE1Q9NXR1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NDE1Q9NXR1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NDE1Q9NXR1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms