Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 KRT8P8-201ENST00000434750 1448 ntBASIC18.15■□□□□ 0.5
SIMC1Q8NDZ2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SIMC1Q8NDZ2 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.14■□□□□ 0.5
SIMC1Q8NDZ2 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 TUBB8P6-201ENST00000436895 1288 ntBASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 AC133681.1-201ENST00000465482 601 ntBASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SIMC1Q8NDZ2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 AL032819.2-201ENST00000624543 2162 ntBASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.13■□□□□ 0.49
SIMC1Q8NDZ2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 SDHAP1-207ENST00000440850 2000 ntBASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 AC110285.5-201ENST00000611501 352 ntBASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.12■□□□□ 0.49
SIMC1Q8NDZ2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 TNXA-203ENST00000507684 2038 ntBASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SIMC1Q8NDZ2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms