Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LCA10Q71F78 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LCA10Q71F78 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LCA10Q71F78 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LCA10Q71F78 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LCA10Q71F78 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC10.38□□□□□ -0.75
LCA10Q71F78 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 MKRN4P-201ENST00000444706 1521 ntBASIC10.38□□□□□ -0.75
LCA10Q71F78 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
LCA10Q71F78 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC10.38□□□□□ -0.75
LCA10Q71F78 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC10.38□□□□□ -0.75
LCA10Q71F78 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 AC136469.2-201ENST00000623944 1028 ntBASIC10.38□□□□□ -0.75
LCA10Q71F78 SIRPAP1-201ENST00000448467 1770 ntBASIC10.38□□□□□ -0.75
LCA10Q71F78 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC10.38□□□□□ -0.75
LCA10Q71F78 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC10.38□□□□□ -0.75
LCA10Q71F78 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LCA10Q71F78 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC10.38□□□□□ -0.75
LCA10Q71F78 AC006128.1-201ENST00000624704 1661 ntBASIC10.38□□□□□ -0.75
LCA10Q71F78 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.37□□□□□ -0.75
LCA10Q71F78 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 CROCCP2-202ENST00000412962 2773 ntBASIC10.37□□□□□ -0.75
LCA10Q71F78 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.37□□□□□ -0.75
LCA10Q71F78 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 TCAF2P1-201ENST00000291129 2421 ntBASIC10.37□□□□□ -0.75
LCA10Q71F78 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC10.37□□□□□ -0.75
LCA10Q71F78 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC10.37□□□□□ -0.75
LCA10Q71F78 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LCA10Q71F78 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LCA10Q71F78 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 TRIR-205ENST00000592273 783 ntTSL 3 BASIC10.37□□□□□ -0.75
LCA10Q71F78 AC011298.3-201ENST00000615796 283 ntBASIC10.37□□□□□ -0.75
LCA10Q71F78 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LCA10Q71F78 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LCA10Q71F78 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 LINC00554-201ENST00000564841 3011 ntBASIC10.37□□□□□ -0.75
LCA10Q71F78 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LCA10Q71F78 AC063926.3-201ENST00000624734 5658 ntBASIC10.37□□□□□ -0.75
LCA10Q71F78 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
LCA10Q71F78 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms