Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC4.62□□□□□ -1.67
KRTAP3-3Q9BYR6 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
KRTAP3-3Q9BYR6 CACNA1S-201ENST00000362061 6166 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 IL2RB-201ENST00000216223 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 CHD3-201ENST00000330494 7328 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 NLRP4-201ENST00000301295 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 KIAA1671-203ENST00000406486 7864 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SRGAP2-217ENST00000624873 4705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 DCTN4-203ENST00000447998 4208 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AP002358.2-201ENST00000532980 2148 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 LMLN-201ENST00000330198 7043 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 TCTN3-207ENST00000614499 2739 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 PHF3-201ENST00000262043 8233 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MYO5A-202ENST00000358212 12220 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MYO5A-206ENST00000399233 12220 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MUC3A-201ENST00000379458 11226 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MAPK10-304ENST00000641341 3984 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 YES1-203ENST00000577961 4554 ntTSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 ABCB1-201ENST00000265724 4645 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RAB6B-207ENST00000543906 5219 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SPTBN1-201ENST00000333896 9075 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU1-22P-201ENST00000363334 158 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU6-1244P-201ENST00000363614 108 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORD115-39-201ENST00000363694 82 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORD115-28-201ENST00000363931 81 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORA1.3-201ENST00000384676 136 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SNORA48-201ENST00000386847 135 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 TRBV6-4-201ENST00000390360 365 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 TRBV6-5-201ENST00000390368 410 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 HPN-AS1-201ENST00000392227 1124 ntTSL 2 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR1249-201ENST00000408671 66 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RNU4-34P-201ENST00000410431 124 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RNA5SP304-201ENST00000411199 104 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC099336.2-201ENST00000422457 254 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AL445685.2-201ENST00000422551 342 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 CFL1P7-201ENST00000424759 486 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RPL19P16-201ENST00000433839 588 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 CKS1BP5-201ENST00000434172 273 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC064862.5-201ENST00000440618 334 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AL772155.3-201ENST00000444097 578 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 BANF1P5-201ENST00000445285 259 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 REG1CP-206ENST00000447469 496 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC099560.2-201ENST00000457554 255 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL446P-201ENST00000476053 296 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RPL36AP48-201ENST00000485521 314 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC091144.2-201ENST00000521717 433 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AP001189.3-201ENST00000531511 651 ntTSL 3 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 COX5AP2-201ENST00000554418 394 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 NDUFB10P2-201ENST00000568872 478 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RN7SL663P-201ENST00000578592 299 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC005520.4-201ENST00000604337 90 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 Metazoa_SRP.82-201ENST00000611637 265 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC007551.2-201ENST00000613889 389 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 LINC00623-202ENST00000614062 830 ntTSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC016991.1-201ENST00000621514 385 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MIR6819-201ENST00000622122 61 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AL031719.2-201ENST00000624488 476 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 DROSHA-201ENST00000344624 5102 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 PSMC2-201ENST00000292644 2637 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 CD163L1-202ENST00000416109 4603 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 DEPDC5-205ENST00000400248 5307 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AL450992.1-201ENST00000432386 4109 ntTSL 2 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 COL12A1-207ENST00000483888 9637 ntAPPRIS ALT1 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MCM3AP-202ENST00000397708 6333 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 NUMA1-202ENST00000358965 7227 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 MAP7D3-203ENST00000370661 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AL136981.1-203ENST00000451452 3844 ntBASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 RBM27-201ENST00000265271 6451 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 NUDCD1-201ENST00000239690 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
KRTAP3-3Q9BYR6 AC107027.3-201ENST00000565095 3473 ntBASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 LRRC37A12P-201ENST00000454917 1801 ntBASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 BCLAF1P1-201ENST00000505813 2752 ntBASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 SCN5A-205ENST00000423572 8362 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 MCM6-201ENST00000264156 3736 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 AP000997.2-201ENST00000564619 8400 ntBASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 CACNB2-205ENST00000377319 3116 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
KRTAP3-3Q9BYR6 IARS2P1-201ENST00000508226 3173 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms