RNA–Protein interactions for RNA: ENST00000390360.3

TRBV6-4-201, Transcript of T cell receptor beta variable 6-4, humanhuman

APPRIS P1 BASIC

Gene TRBV6-4, Length 365 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4-201ENST00000390360 NISCHQ9Y2I1 1504 aa23.86■■□□□ 1.41
TRBV6-4-201ENST00000390360 CCDC180Q9P1Z9 1646 aa21.16■□□□□ 0.98
TRBV6-4-201ENST00000390360 ABCC9O60706 1549 aa20.67■□□□□ 0.9
TRBV6-4-201ENST00000390360 DCAF8L2P0C7V8 631 aa19.97■□□□□ 0.79
TRBV6-4-201ENST00000390360 NACADO15069 1562 aa19.92■□□□□ 0.78
TRBV6-4-201ENST00000390360 RB1CC1Q8TDY2 1594 aa19.92■□□□□ 0.78
TRBV6-4-201ENST00000390360 ZCCHC6Q5VYS8 1495 aaKnown RBP19.88■□□□□ 0.77
TRBV6-4-201ENST00000390360 MYO15BQ96JP2 1530 aa19.83■□□□□ 0.77
TRBV6-4-201ENST00000390360 DCAF1Q9Y4B6 1507 aa19.76■□□□□ 0.75
TRBV6-4-201ENST00000390360 UNC13AQ9UPW8 1703 aa19.37■□□□□ 0.69
TRBV6-4-201ENST00000390360 PABPN1Q86U42 306 aaKnown RBP eCLIP19.35■□□□□ 0.69
TRBV6-4-201ENST00000390360 SCRIBQ14160 1630 aa19.32■□□□□ 0.68
TRBV6-4-201ENST00000390360 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
TRBV6-4-201ENST00000390360 SHROOM4Q9ULL8 1493 aa19.15■□□□□ 0.66
TRBV6-4-201ENST00000390360 DNAJC5BQ9UF47 199 aa18.9■□□□□ 0.62
TRBV6-4-201ENST00000390360 EIF4G1Q04637 1599 aaKnown RBP18.78■□□□□ 0.6
TRBV6-4-201ENST00000390360 CC2D2AQ9P2K1 1620 aa18.67■□□□□ 0.58
TRBV6-4-201ENST00000390360 CECR2Q9BXF3 1484 aa18.58■□□□□ 0.57
TRBV6-4-201ENST00000390360 BAZ1AQ9NRL2 1556 aaPredicted RBP18.5■□□□□ 0.55
TRBV6-4-201ENST00000390360 SMARCA4P51532 1647 aa18.48■□□□□ 0.55
TRBV6-4-201ENST00000390360 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
TRBV6-4-201ENST00000390360 ATAD2BQ9ULI0 1458 aa18.39■□□□□ 0.53
TRBV6-4-201ENST00000390360 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
TRBV6-4-201ENST00000390360 MROH2BQ7Z745 1585 aa18.37■□□□□ 0.53
TRBV6-4-201ENST00000390360 PEG3Q9GZU2 1588 aa18.31■□□□□ 0.52
TRBV6-4-201ENST00000390360 HMGXB3Q12766 1538 aa18.28■□□□□ 0.52
TRBV6-4-201ENST00000390360 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
TRBV6-4-201ENST00000390360 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
TRBV6-4-201ENST00000390360 WIZO95785 1651 aa18.15■□□□□ 0.5
TRBV6-4-201ENST00000390360 TOP2AP11388 1531 aaKnown RBP18.01■□□□□ 0.47
TRBV6-4-201ENST00000390360 NESP48681 1621 aa17.88■□□□□ 0.45
TRBV6-4-201ENST00000390360 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
TRBV6-4-201ENST00000390360 CADPSQ9ULU8 1353 aa17.86■□□□□ 0.45
TRBV6-4-201ENST00000390360 ERCC6Q03468 1493 aa17.85■□□□□ 0.45
TRBV6-4-201ENST00000390360 SUPT5HO00267 1087 aaKnown RBP17.83■□□□□ 0.44
TRBV6-4-201ENST00000390360 PDS5BQ9NTI5 1447 aa17.8■□□□□ 0.44
TRBV6-4-201ENST00000390360 CCDC88BA6NC98 1476 aa17.79■□□□□ 0.44
TRBV6-4-201ENST00000390360 CFTRP13569 1480 aa17.75■□□□□ 0.43
TRBV6-4-201ENST00000390360 FANCD2Q9BXW9 1451 aa17.64■□□□□ 0.41
TRBV6-4-201ENST00000390360 KIF21AQ7Z4S6 1674 aa17.64■□□□□ 0.41
TRBV6-4-201ENST00000390360 CUX2O14529 1486 aa17.63■□□□□ 0.41
TRBV6-4-201ENST00000390360 CEP164Q9UPV0 1460 aa17.63■□□□□ 0.41
TRBV6-4-201ENST00000390360 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
TRBV6-4-201ENST00000390360 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
TRBV6-4-201ENST00000390360 PRDM2Q13029 1718 aa17.55■□□□□ 0.4
TRBV6-4-201ENST00000390360 WDR62O43379 1518 aa17.5■□□□□ 0.39
TRBV6-4-201ENST00000390360 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
TRBV6-4-201ENST00000390360 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
TRBV6-4-201ENST00000390360 TOPBP1Q92547 1522 aa17.36■□□□□ 0.37
TRBV6-4-201ENST00000390360 DNMBPQ6XZF7 1577 aa17.34■□□□□ 0.37
TRBV6-4-201ENST00000390360 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
TRBV6-4-201ENST00000390360 CUX1P39880 1505 aa17.23■□□□□ 0.35
TRBV6-4-201ENST00000390360 POLA1P09884 1462 aaPredicted RBP17.22■□□□□ 0.35
TRBV6-4-201ENST00000390360 WRNQ14191 1432 aaPredicted RBP eCLIP17.19■□□□□ 0.34
TRBV6-4-201ENST00000390360 FGD5Q6ZNL6 1462 aa17.18■□□□□ 0.34
TRBV6-4-201ENST00000390360 SOGA1O94964 1423 aa17.17■□□□□ 0.34
TRBV6-4-201ENST00000390360 RAD54L2Q9Y4B4 1467 aa17.13■□□□□ 0.33
TRBV6-4-201ENST00000390360 ZNF608Q9ULD9 1512 aaPredicted RBP17.13■□□□□ 0.33
TRBV6-4-201ENST00000390360 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
TRBV6-4-201ENST00000390360 TOP2BQ02880 1626 aa17.11■□□□□ 0.33
TRBV6-4-201ENST00000390360 SYNJ1O43426 1573 aa17.09■□□□□ 0.33
TRBV6-4-201ENST00000390360 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
TRBV6-4-201ENST00000390360 AQRO60306 1485 aaKnown RBP eCLIP17.06■□□□□ 0.32
TRBV6-4-201ENST00000390360 TDRD9Q8NDG6 1382 aaKnown RBP17.06■□□□□ 0.32
TRBV6-4-201ENST00000390360 EIF4G3O43432 1585 aaKnown RBP17.06■□□□□ 0.32
TRBV6-4-201ENST00000390360 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
TRBV6-4-201ENST00000390360 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
TRBV6-4-201ENST00000390360 DNAJC5Q9H3Z4 198 aa17.02■□□□□ 0.32
TRBV6-4-201ENST00000390360 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
TRBV6-4-201ENST00000390360 GRIN2BQ13224 1484 aa16.96■□□□□ 0.31
TRBV6-4-201ENST00000390360 OSCARQ8IYS5 282 aa16.95■□□□□ 0.3
TRBV6-4-201ENST00000390360 SNAPC4Q5SXM2 1469 aa16.92■□□□□ 0.3
TRBV6-4-201ENST00000390360 MAGI1Q96QZ7 1491 aaPredicted RBP16.92■□□□□ 0.3
TRBV6-4-201ENST00000390360 ABCA5Q8WWZ7 1642 aa16.92■□□□□ 0.3
TRBV6-4-201ENST00000390360 FBLN2P98095 1184 aa16.9■□□□□ 0.3
TRBV6-4-201ENST00000390360 CHMP7Q8WUX9 453 aaPredicted RBP16.87■□□□□ 0.29
TRBV6-4-201ENST00000390360 PBRM1Q86U86 1689 aa16.86■□□□□ 0.29
TRBV6-4-201ENST00000390360 TRIM41Q8WV44 630 aa16.86■□□□□ 0.29
TRBV6-4-201ENST00000390360 SYNJ2O15056 1496 aa16.85■□□□□ 0.29
TRBV6-4-201ENST00000390360 KIF27Q86VH2 1401 aa16.84■□□□□ 0.29
TRBV6-4-201ENST00000390360 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.28
TRBV6-4-201ENST00000390360 CHD1O14646 1710 aa16.81■□□□□ 0.28
TRBV6-4-201ENST00000390360 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
TRBV6-4-201ENST00000390360 ADAMTS12P58397 1594 aa16.76■□□□□ 0.27
TRBV6-4-201ENST00000390360 IGF1RP08069 1367 aa16.75■□□□□ 0.27
TRBV6-4-201ENST00000390360 GRIN2AQ12879 1464 aa16.73■□□□□ 0.27
TRBV6-4-201ENST00000390360 CUL7Q14999 1698 aa16.67■□□□□ 0.26
TRBV6-4-201ENST00000390360 CHIC1Q5VXU3 224 aa16.66■□□□□ 0.26
TRBV6-4-201ENST00000390360 CLASP1Q7Z460 1538 aa16.65■□□□□ 0.26
TRBV6-4-201ENST00000390360 CARMIL1Q5VZK9 1371 aa16.65■□□□□ 0.26
TRBV6-4-201ENST00000390360 NUP160Q12769 1436 aa16.65■□□□□ 0.26
TRBV6-4-201ENST00000390360 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
TRBV6-4-201ENST00000390360 CEP170Q5SW79 1584 aa16.61■□□□□ 0.25
TRBV6-4-201ENST00000390360 ARHGEF11O15085 1522 aa16.6■□□□□ 0.25
TRBV6-4-201ENST00000390360 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
TRBV6-4-201ENST00000390360 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
TRBV6-4-201ENST00000390360 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
TRBV6-4-201ENST00000390360 EEA1Q15075 1411 aa16.57■□□□□ 0.24
TRBV6-4-201ENST00000390360 RAPGEF2Q9Y4G8 1499 aa16.56■□□□□ 0.24
TRBV6-4-201ENST00000390360 CSRNP3Q8WYN3 585 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms