RNA–Protein interactions for RNA: ENST00000400248.6

DEPDC5-205, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 5,307 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-205ENST00000400248 NISCHQ9Y2I1 1504 aa17.33■□□□□ 0.36
DEPDC5-205ENST00000400248 DCAF8L2P0C7V8 631 aa16.7■□□□□ 0.26
DEPDC5-205ENST00000400248 SUPT5HO00267 1087 aaKnown RBP16.31■□□□□ 0.2
DEPDC5-205ENST00000400248 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
DEPDC5-205ENST00000400248 EHMT2Q96KQ7 1210 aa15.64■□□□□ 0.09
DEPDC5-205ENST00000400248 PELP1Q8IZL8 1130 aaKnown RBP15.59■□□□□ 0.09
DEPDC5-205ENST00000400248 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
DEPDC5-205ENST00000400248 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
DEPDC5-205ENST00000400248 ZEB1P37275 1124 aaPredicted RBP15.32■□□□□ 0.04
DEPDC5-205ENST00000400248 APLP2Q06481 763 aa15.32■□□□□ 0.04
DEPDC5-205ENST00000400248 CENPBP07199 599 aaPredicted RBP15.26■□□□□ 0.03
DEPDC5-205ENST00000400248 TTBK1Q5TCY1 1321 aaPredicted RBP15.17■□□□□ 0.02
DEPDC5-205ENST00000400248 CCER1Q8TC90 406 aaPredicted RBP15.13■□□□□ 0.01
DEPDC5-205ENST00000400248 TRIM41Q8WV44 630 aa15.1■□□□□ 0.01
DEPDC5-205ENST00000400248 HRCP23327 699 aa15.02■□□□□ -0
DEPDC5-205ENST00000400248 MYT1Q01538 1121 aa14.99□□□□□ -0.01
DEPDC5-205ENST00000400248 TRIM26Q12899 539 aaPredicted RBP14.93□□□□□ -0.02
DEPDC5-205ENST00000400248 ERICH6Q7L0X2 663 aa14.92□□□□□ -0.02
DEPDC5-205ENST00000400248 YTHDC1Q96MU7 727 aaKnown RBP14.85□□□□□ -0.03
DEPDC5-205ENST00000400248 RANGAP1P46060 587 aaPredicted RBP14.85□□□□□ -0.03
DEPDC5-205ENST00000400248 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
DEPDC5-205ENST00000400248 PPARGC1BQ86YN6 1023 aaKnown RBP14.76□□□□□ -0.05
DEPDC5-205ENST00000400248 CHIC1Q5VXU3 224 aa14.76□□□□□ -0.05
DEPDC5-205ENST00000400248 NEFLP07196 543 aa14.75□□□□□ -0.05
DEPDC5-205ENST00000400248 LOC105371045A0A1W2PR82 267 aa14.7□□□□□ -0.06
DEPDC5-205ENST00000400248 ATP1B4Q9UN42 357 aaPredicted RBP14.64□□□□□ -0.07
DEPDC5-205ENST00000400248 CCDC180Q9P1Z9 1646 aa14.64□□□□□ -0.07
DEPDC5-205ENST00000400248 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
DEPDC5-205ENST00000400248 DIEXFQ68CQ4 756 aaKnown RBP14.44□□□□□ -0.1
DEPDC5-205ENST00000400248 HNRNPUL2Q1KMD3 747 aaKnown RBP14.42□□□□□ -0.1
DEPDC5-205ENST00000400248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.42□□□□□ -0.1
DEPDC5-205ENST00000400248 ABCC9O60706 1549 aa14.42□□□□□ -0.1
DEPDC5-205ENST00000400248 ITGAEP38570 1179 aa14.36□□□□□ -0.11
DEPDC5-205ENST00000400248 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
DEPDC5-205ENST00000400248 MYT1LQ9UL68 1186 aa14.21□□□□□ -0.13
DEPDC5-205ENST00000400248 DAXXQ9UER7 740 aaPredicted RBP14.21□□□□□ -0.13
DEPDC5-205ENST00000400248 POLR3GLQ9BT43 218 aa14.17□□□□□ -0.14
DEPDC5-205ENST00000400248 ACIN1Q9UKV3 1341 aaKnown RBP14.12□□□□□ -0.15
DEPDC5-205ENST00000400248 ZNF316A6NFI3 1004 aaPredicted RBP14.09□□□□□ -0.15
DEPDC5-205ENST00000400248 CNGB1Q14028 1251 aaPredicted RBP14.07□□□□□ -0.16
DEPDC5-205ENST00000400248 RTL5Q5HYW3 569 aaPredicted RBP14.07□□□□□ -0.16
DEPDC5-205ENST00000400248 DCAF1Q9Y4B6 1507 aa14.05□□□□□ -0.16
DEPDC5-205ENST00000400248 BCANQ96GW7 911 aa14.04□□□□□ -0.16
DEPDC5-205ENST00000400248 SCRIBQ14160 1630 aa14.04□□□□□ -0.16
DEPDC5-205ENST00000400248 FAM50AQ14320 339 aaKnown RBP14□□□□□ -0.17
DEPDC5-205ENST00000400248 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
DEPDC5-205ENST00000400248 NEUROD1Q13562 356 aa13.97□□□□□ -0.17
DEPDC5-205ENST00000400248 NACADO15069 1562 aa13.96□□□□□ -0.17
DEPDC5-205ENST00000400248 ANP32CO43423 234 aa13.95□□□□□ -0.18
DEPDC5-205ENST00000400248 RB1CC1Q8TDY2 1594 aa13.94□□□□□ -0.18
DEPDC5-205ENST00000400248 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
DEPDC5-205ENST00000400248 TRIM52Q96A61 297 aa13.87□□□□□ -0.19
DEPDC5-205ENST00000400248 CLSPNQ9HAW4 1339 aa13.87□□□□□ -0.19
DEPDC5-205ENST00000400248 CSRNP3Q8WYN3 585 aa13.83□□□□□ -0.2
DEPDC5-205ENST00000400248 SCAF1Q9H7N4 1312 aaKnown RBP13.78□□□□□ -0.2
DEPDC5-205ENST00000400248 SLC4A1APQ9BWU0 796 aaKnown RBP13.73□□□□□ -0.21
DEPDC5-205ENST00000400248 MYO15BQ96JP2 1530 aa13.73□□□□□ -0.21
DEPDC5-205ENST00000400248 FKBP8Q14318 412 aa13.71□□□□□ -0.21
DEPDC5-205ENST00000400248 ZNF326Q5BKZ1 582 aaKnown RBP13.71□□□□□ -0.22
DEPDC5-205ENST00000400248 RSF1Q96T23 1441 aaPredicted RBP13.69□□□□□ -0.22
DEPDC5-205ENST00000400248 ANP32AP39687 249 aaKnown RBP13.67□□□□□ -0.22
DEPDC5-205ENST00000400248 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
DEPDC5-205ENST00000400248 MIER1Q8N108 512 aa13.6□□□□□ -0.23
DEPDC5-205ENST00000400248 P3H3Q8IVL6 736 aa13.59□□□□□ -0.23
DEPDC5-205ENST00000400248 HNRNPUQ00839 825 aaKnown RBP eCLIP13.57□□□□□ -0.24
DEPDC5-205ENST00000400248 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
DEPDC5-205ENST00000400248 TONSLQ96HA7 1378 aa13.55□□□□□ -0.24
DEPDC5-205ENST00000400248 NPM2Q86SE8 214 aaKnown RBP13.55□□□□□ -0.24
DEPDC5-205ENST00000400248 CANXP27824 592 aaKnown RBP13.52□□□□□ -0.24
DEPDC5-205ENST00000400248 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
DEPDC5-205ENST00000400248 FAM9BQ8IZU0 186 aa13.48□□□□□ -0.25
DEPDC5-205ENST00000400248 EEA1Q15075 1411 aa13.45□□□□□ -0.26
DEPDC5-205ENST00000400248 ARID3CA6NKF2 412 aa13.44□□□□□ -0.26
DEPDC5-205ENST00000400248 CECR2Q9BXF3 1484 aa13.43□□□□□ -0.26
DEPDC5-205ENST00000400248 CCDC136Q96JN2 1154 aa13.42□□□□□ -0.26
DEPDC5-205ENST00000400248 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
DEPDC5-205ENST00000400248 BAZ1BQ9UIG0 1483 aaKnown RBP13.41□□□□□ -0.26
DEPDC5-205ENST00000400248 NBR1Q14596 966 aa13.39□□□□□ -0.27
DEPDC5-205ENST00000400248 CLIP1P30622 1438 aa13.39□□□□□ -0.27
DEPDC5-205ENST00000400248 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
DEPDC5-205ENST00000400248 FBLN2P98095 1184 aa13.37□□□□□ -0.27
DEPDC5-205ENST00000400248 MRS2Q9HD23 443 aa13.37□□□□□ -0.27
DEPDC5-205ENST00000400248 SLC24A1O60721 1099 aa13.35□□□□□ -0.27
DEPDC5-205ENST00000400248 IRX6P78412 446 aaPredicted RBP13.35□□□□□ -0.27
DEPDC5-205ENST00000400248 CEP162Q5TB80 1403 aa13.35□□□□□ -0.27
DEPDC5-205ENST00000400248 TMC1Q8TDI8 760 aa13.35□□□□□ -0.27
DEPDC5-205ENST00000400248 BCL11AQ9H165 835 aa13.35□□□□□ -0.27
DEPDC5-205ENST00000400248 MROH2BQ7Z745 1585 aa13.35□□□□□ -0.27
DEPDC5-205ENST00000400248 ESF1Q9H501 851 aaKnown RBP13.35□□□□□ -0.27
DEPDC5-205ENST00000400248 NEFMP07197 916 aa13.34□□□□□ -0.27
DEPDC5-205ENST00000400248 ANP32EQ9BTT0 268 aa13.34□□□□□ -0.27
DEPDC5-205ENST00000400248 GOLGA3Q08378 1498 aa13.34□□□□□ -0.27
DEPDC5-205ENST00000400248 HIRIP3Q9BW71 556 aaPredicted RBP13.33□□□□□ -0.28
DEPDC5-205ENST00000400248 SALL2Q9Y467 1007 aaPredicted RBP13.32□□□□□ -0.28
DEPDC5-205ENST00000400248 UPF2Q9HAU5 1272 aaKnown RBP13.32□□□□□ -0.28
DEPDC5-205ENST00000400248 CHIC2Q9UKJ5 165 aa13.3□□□□□ -0.28
DEPDC5-205ENST00000400248 TNIKQ9UKE5 1360 aa13.3□□□□□ -0.28
DEPDC5-205ENST00000400248 WRNQ14191 1432 aaPredicted RBP eCLIP13.29□□□□□ -0.289e-6■■■■■ 50.1
DEPDC5-205ENST00000400248 ANP32BQ92688 251 aaKnown RBP13.29□□□□□ -0.28
DEPDC5-205ENST00000400248 EIF4G2P78344 907 aaKnown RBP eCLIP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms