RNA–Protein interactions for RNA: ENST00000417307.2

CTXN2-201, Transcript of cortexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTXN2, Length 2,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTXN2-201ENST00000417307 CHIC1Q5VXU3 224 aa10.82□□□□□ -0.68
CTXN2-201ENST00000417307 AEBP2Q6ZN18 517 aaPredicted RBP10.28□□□□□ -0.76
CTXN2-201ENST00000417307 POTEDQ86YR6 584 aa10.24□□□□□ -0.77
CTXN2-201ENST00000417307 SLC24A1O60721 1099 aa9.87□□□□□ -0.83
CTXN2-201ENST00000417307 PHF23Q9BUL5 403 aaPredicted RBP9.74□□□□□ -0.85
CTXN2-201ENST00000417307 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
CTXN2-201ENST00000417307 SENP3Q9H4L4 574 aaPredicted RBP9.29□□□□□ -0.92
CTXN2-201ENST00000417307 PLPPR3Q6T4P5 718 aa9.28□□□□□ -0.92
CTXN2-201ENST00000417307 CSRNP3Q8WYN3 585 aa9.18□□□□□ -0.94
CTXN2-201ENST00000417307 RTN4Q9NQC3 1192 aaKnown RBP9.17□□□□□ -0.94
CTXN2-201ENST00000417307 KCNA4P22459 653 aa9.15□□□□□ -0.94
CTXN2-201ENST00000417307 AMER1Q5JTC6 1135 aaPredicted RBP9□□□□□ -0.97
CTXN2-201ENST00000417307 NCBP3Q53F19 620 aaKnown RBP8.87□□□□□ -0.99
CTXN2-201ENST00000417307 SLC4A1APQ9BWU0 796 aaKnown RBP8.78□□□□□ -1
CTXN2-201ENST00000417307 ADRA2BP18089 450 aa8.68□□□□□ -1.02
CTXN2-201ENST00000417307 DAXXQ9UER7 740 aaPredicted RBP8.67□□□□□ -1.02
CTXN2-201ENST00000417307 NISCHQ9Y2I1 1504 aa8.65□□□□□ -1.02
CTXN2-201ENST00000417307 DNAJC5Q9H3Z4 198 aa8.62□□□□□ -1.03
CTXN2-201ENST00000417307 PRKCSHP14314 528 aaPredicted RBP8.6□□□□□ -1.03
CTXN2-201ENST00000417307 DNAJC5BQ9UF47 199 aa8.58□□□□□ -1.04
CTXN2-201ENST00000417307 ZBTB22O15209 634 aa8.53□□□□□ -1.04
CTXN2-201ENST00000417307 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
CTXN2-201ENST00000417307 MSH5O43196 834 aa8.38□□□□□ -1.07
CTXN2-201ENST00000417307 FOXD1Q16676 465 aa8.35□□□□□ -1.07
CTXN2-201ENST00000417307 TIMELESSQ9UNS1 1208 aa8.35□□□□□ -1.07
CTXN2-201ENST00000417307 ARXQ96QS3 562 aa8.35□□□□□ -1.07
CTXN2-201ENST00000417307 BCANQ96GW7 911 aa8.31□□□□□ -1.08
CTXN2-201ENST00000417307 PLCB2Q00722 1185 aa8.31□□□□□ -1.08
CTXN2-201ENST00000417307 PPP6R1Q9UPN7 881 aa8.29□□□□□ -1.08
CTXN2-201ENST00000417307 NPM3O75607 178 aaKnown RBP8.24□□□□□ -1.09
CTXN2-201ENST00000417307 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
CTXN2-201ENST00000417307 PPP4R3CPQ6ZMV5 832 aa8.21□□□□□ -1.1
CTXN2-201ENST00000417307 TULP1O00294 542 aaPredicted RBP8.2□□□□□ -1.1
CTXN2-201ENST00000417307 FKBP8Q14318 412 aa8.14□□□□□ -1.11
CTXN2-201ENST00000417307 HAP1P54257 671 aaPredicted RBP8.13□□□□□ -1.11
CTXN2-201ENST00000417307 ABCC9O60706 1549 aa8.11□□□□□ -1.11
CTXN2-201ENST00000417307 HOMEZQ8IX15 550 aa8.07□□□□□ -1.12
CTXN2-201ENST00000417307 FOXD4L1Q9NU39 408 aa8.05□□□□□ -1.12
CTXN2-201ENST00000417307 VSIG10Q8N0Z9 540 aa8.05□□□□□ -1.12
CTXN2-201ENST00000417307 GTF3C3Q9Y5Q9 886 aa8.04□□□□□ -1.12
CTXN2-201ENST00000417307 KDM2AQ9Y2K7 1162 aa7.98□□□□□ -1.13
CTXN2-201ENST00000417307 TMEM132AQ24JP5 1023 aa7.89□□□□□ -1.15
CTXN2-201ENST00000417307 FBLN2P98095 1184 aa7.88□□□□□ -1.15
CTXN2-201ENST00000417307 ERICH6Q7L0X2 663 aa7.88□□□□□ -1.15
CTXN2-201ENST00000417307 TRIM41Q8WV44 630 aa7.87□□□□□ -1.15
CTXN2-201ENST00000417307 APLP2Q06481 763 aa7.85□□□□□ -1.15
CTXN2-201ENST00000417307 RANGAP1P46060 587 aaPredicted RBP7.84□□□□□ -1.15
CTXN2-201ENST00000417307 PODXL2Q9NZ53 605 aa7.82□□□□□ -1.16
CTXN2-201ENST00000417307 CACNB1Q02641 598 aaPredicted RBP7.81□□□□□ -1.16
CTXN2-201ENST00000417307 KLHL34Q8N239 644 aa7.79□□□□□ -1.16
CTXN2-201ENST00000417307 PELP1Q8IZL8 1130 aaKnown RBP7.78□□□□□ -1.16
CTXN2-201ENST00000417307 POTEHQ6S545 545 aa7.77□□□□□ -1.17
CTXN2-201ENST00000417307 PIAS4Q8N2W9 510 aaPredicted RBP7.75□□□□□ -1.17
CTXN2-201ENST00000417307 C14orf37Q86TY3 774 aa7.74□□□□□ -1.17
CTXN2-201ENST00000417307 CNKSR2Q8WXI2 1034 aa7.73□□□□□ -1.17
CTXN2-201ENST00000417307 HRCP23327 699 aa7.69□□□□□ -1.18
CTXN2-201ENST00000417307 DCAF8L2P0C7V8 631 aa7.68□□□□□ -1.18
CTXN2-201ENST00000417307 ATXN8OSP0DMR3 200 aa7.66□□□□□ -1.18
CTXN2-201ENST00000417307 PKD2Q13563 968 aa7.65□□□□□ -1.19
CTXN2-201ENST00000417307 NPM2Q86SE8 214 aaKnown RBP7.63□□□□□ -1.19
CTXN2-201ENST00000417307 ILDR1Q86SU0 546 aaPredicted RBP7.63□□□□□ -1.19
CTXN2-201ENST00000417307 MYT1Q01538 1121 aa7.62□□□□□ -1.19
CTXN2-201ENST00000417307 NPM1P06748 294 aaKnown RBP eCLIP7.61□□□□□ -1.19
CTXN2-201ENST00000417307 BBXQ8WY36 941 aaPredicted RBP7.61□□□□□ -1.19
CTXN2-201ENST00000417307 TRIM26Q12899 539 aaPredicted RBP7.61□□□□□ -1.19
CTXN2-201ENST00000417307 PAXIP1Q6ZW49 1069 aaPredicted RBP7.61□□□□□ -1.19
CTXN2-201ENST00000417307 TSHZ2Q9NRE2 1034 aa7.6□□□□□ -1.19
CTXN2-201ENST00000417307 SUPT5HO00267 1087 aaKnown RBP7.6□□□□□ -1.19
CTXN2-201ENST00000417307 SLC4A2P04920 1241 aa7.56□□□□□ -1.2
CTXN2-201ENST00000417307 CFAP44Q96MT7 982 aa7.56□□□□□ -1.2
CTXN2-201ENST00000417307 FBXO3Q9UK99 471 aa7.56□□□□□ -1.2
CTXN2-201ENST00000417307 TTBK1Q5TCY1 1321 aaPredicted RBP7.56□□□□□ -1.2
CTXN2-201ENST00000417307 UBTFP17480 764 aaKnown RBP7.56□□□□□ -1.2
CTXN2-201ENST00000417307 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.56□□□□□ -1.2
CTXN2-201ENST00000417307 NBR1Q14596 966 aa7.53□□□□□ -1.2
CTXN2-201ENST00000417307 IFNLR1Q8IU57 520 aaPredicted RBP7.51□□□□□ -1.21
CTXN2-201ENST00000417307 DCAF1Q9Y4B6 1507 aa7.51□□□□□ -1.21
CTXN2-201ENST00000417307 ZEB1P37275 1124 aaPredicted RBP7.46□□□□□ -1.21
CTXN2-201ENST00000417307 VASPP50552 380 aaPredicted RBP7.46□□□□□ -1.21
CTXN2-201ENST00000417307 MYCNP04198 464 aaPredicted RBP7.45□□□□□ -1.22
CTXN2-201ENST00000417307 PABPN1Q86U42 306 aaKnown RBP eCLIP7.44□□□□□ -1.22
CTXN2-201ENST00000417307 SPRYD3Q8NCJ5 442 aa7.43□□□□□ -1.22
CTXN2-201ENST00000417307 CCDC180Q9P1Z9 1646 aa7.43□□□□□ -1.22
CTXN2-201ENST00000417307 ZCCHC6Q5VYS8 1495 aaKnown RBP7.39□□□□□ -1.23
CTXN2-201ENST00000417307 CECR2Q9BXF3 1484 aa7.39□□□□□ -1.23
CTXN2-201ENST00000417307 ATF5Q9Y2D1 282 aaPredicted RBP7.37□□□□□ -1.23
CTXN2-201ENST00000417307 LOC105371045A0A1W2PR82 267 aa7.36□□□□□ -1.23
CTXN2-201ENST00000417307 RNF216Q9NWF9 866 aaPredicted RBP7.36□□□□□ -1.23
CTXN2-201ENST00000417307 PROM2Q8N271 834 aa7.36□□□□□ -1.23
CTXN2-201ENST00000417307 CUX2O14529 1486 aa7.35□□□□□ -1.23
CTXN2-201ENST00000417307 PCGF6Q9BYE7 350 aa7.34□□□□□ -1.23
CTXN2-201ENST00000417307 SCAF1Q9H7N4 1312 aaKnown RBP7.34□□□□□ -1.23
CTXN2-201ENST00000417307 TRHP20396 242 aaPredicted RBP7.33□□□□□ -1.24
CTXN2-201ENST00000417307 BRPF1P55201 1214 aaPredicted RBP7.33□□□□□ -1.24
CTXN2-201ENST00000417307 MYO15BQ96JP2 1530 aa7.31□□□□□ -1.24
CTXN2-201ENST00000417307 RGL2O15211 777 aa7.3□□□□□ -1.24
CTXN2-201ENST00000417307 ECM2O94769 699 aaPredicted RBP7.29□□□□□ -1.24
CTXN2-201ENST00000417307 SHROOM4Q9ULL8 1493 aa7.28□□□□□ -1.24
CTXN2-201ENST00000417307 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
CTXN2-201ENST00000417307 MAPK8IP2Q13387 824 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms