RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 AEBP2Q6ZN18 517 aaPredicted RBP10.5□□□□□ -0.73
CDH9-201ENST00000231021 CHIC1Q5VXU3 224 aa10.28□□□□□ -0.76
CDH9-201ENST00000231021 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
CDH9-201ENST00000231021 SENP3Q9H4L4 574 aaPredicted RBP9.13□□□□□ -0.95
CDH9-201ENST00000231021 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
CDH9-201ENST00000231021 PHF23Q9BUL5 403 aaPredicted RBP8.89□□□□□ -0.99
CDH9-201ENST00000231021 PLPPR3Q6T4P5 718 aa8.74□□□□□ -1.01
CDH9-201ENST00000231021 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
CDH9-201ENST00000231021 FOXD1Q16676 465 aa8.35□□□□□ -1.07
CDH9-201ENST00000231021 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
CDH9-201ENST00000231021 KCNA4P22459 653 aa8.23□□□□□ -1.09
CDH9-201ENST00000231021 CSRNP3Q8WYN3 585 aa8.15□□□□□ -1.1
CDH9-201ENST00000231021 DAXXQ9UER7 740 aaPredicted RBP8.09□□□□□ -1.11
CDH9-201ENST00000231021 NCBP3Q53F19 620 aaKnown RBP8.05□□□□□ -1.12
CDH9-201ENST00000231021 MSH5O43196 834 aa7.96□□□□□ -1.14
CDH9-201ENST00000231021 TIMELESSQ9UNS1 1208 aa7.94□□□□□ -1.14
CDH9-201ENST00000231021 AMER1Q5JTC6 1135 aaPredicted RBP7.92□□□□□ -1.14
CDH9-201ENST00000231021 TULP1O00294 542 aaPredicted RBP7.8□□□□□ -1.16
CDH9-201ENST00000231021 PPP6R1Q9UPN7 881 aa7.79□□□□□ -1.16
CDH9-201ENST00000231021 PIAS4Q8N2W9 510 aaPredicted RBP7.78□□□□□ -1.16
CDH9-201ENST00000231021 ADRA2BP18089 450 aa7.76□□□□□ -1.17
CDH9-201ENST00000231021 TAOK2Q9UL54 1235 aa7.71□□□□□ -1.18
CDH9-201ENST00000231021 TPRNQ4KMQ1 711 aa7.67□□□□□ -1.18
CDH9-201ENST00000231021 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
CDH9-201ENST00000231021 SLC4A1APQ9BWU0 796 aaKnown RBP7.64□□□□□ -1.19
CDH9-201ENST00000231021 APLP2Q06481 763 aa7.62□□□□□ -1.19
CDH9-201ENST00000231021 ZBTB22O15209 634 aa7.6□□□□□ -1.19
CDH9-201ENST00000231021 ARXQ96QS3 562 aa7.57□□□□□ -1.2
CDH9-201ENST00000231021 PODXL2Q9NZ53 605 aa7.5□□□□□ -1.21
CDH9-201ENST00000231021 HAP1P54257 671 aaPredicted RBP7.48□□□□□ -1.21
CDH9-201ENST00000231021 PLCB2Q00722 1185 aa7.44□□□□□ -1.22
CDH9-201ENST00000231021 BCANQ96GW7 911 aa7.44□□□□□ -1.22
CDH9-201ENST00000231021 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
CDH9-201ENST00000231021 SCAF1Q9H7N4 1312 aaKnown RBP7.39□□□□□ -1.23
CDH9-201ENST00000231021 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
CDH9-201ENST00000231021 ERICH6Q7L0X2 663 aa7.39□□□□□ -1.23
CDH9-201ENST00000231021 PLEKHG5O94827 1062 aa7.37□□□□□ -1.23
CDH9-201ENST00000231021 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
CDH9-201ENST00000231021 POTEDQ86YR6 584 aa7.35□□□□□ -1.23
CDH9-201ENST00000231021 PELP1Q8IZL8 1130 aaKnown RBP7.35□□□□□ -1.23
CDH9-201ENST00000231021 FBLN2P98095 1184 aa7.33□□□□□ -1.24
CDH9-201ENST00000231021 SUPT5HO00267 1087 aaKnown RBP7.31□□□□□ -1.24
CDH9-201ENST00000231021 KDM2AQ9Y2K7 1162 aa7.31□□□□□ -1.24
CDH9-201ENST00000231021 FKBP8Q14318 412 aa7.3□□□□□ -1.24
CDH9-201ENST00000231021 EIF5BO60841 1220 aaKnown RBP7.29□□□□□ -1.24
CDH9-201ENST00000231021 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
CDH9-201ENST00000231021 NPM3O75607 178 aaKnown RBP7.26□□□□□ -1.25
CDH9-201ENST00000231021 TRIM26Q12899 539 aaPredicted RBP7.25□□□□□ -1.25
CDH9-201ENST00000231021 NPM2Q86SE8 214 aaKnown RBP7.24□□□□□ -1.25
CDH9-201ENST00000231021 C14orf37Q86TY3 774 aa7.24□□□□□ -1.25
CDH9-201ENST00000231021 TTBK1Q5TCY1 1321 aaPredicted RBP7.23□□□□□ -1.25
CDH9-201ENST00000231021 TMEM132AQ24JP5 1023 aa7.22□□□□□ -1.25
CDH9-201ENST00000231021 UBTFP17480 764 aaKnown RBP7.22□□□□□ -1.25
CDH9-201ENST00000231021 LOC105371045A0A1W2PR82 267 aa7.2□□□□□ -1.26
CDH9-201ENST00000231021 PPP4R3CPQ6ZMV5 832 aa7.19□□□□□ -1.26
CDH9-201ENST00000231021 DCAF8L2P0C7V8 631 aa7.17□□□□□ -1.26
CDH9-201ENST00000231021 HRCP23327 699 aa7.16□□□□□ -1.26
CDH9-201ENST00000231021 MYT1Q01538 1121 aa7.16□□□□□ -1.26
CDH9-201ENST00000231021 CNKSR2Q8WXI2 1034 aa7.14□□□□□ -1.27
CDH9-201ENST00000231021 DNAJC5BQ9UF47 199 aa7.12□□□□□ -1.27
CDH9-201ENST00000231021 HOXD11P31277 338 aaPredicted RBP7.11□□□□□ -1.27
CDH9-201ENST00000231021 RNF216Q9NWF9 866 aaPredicted RBP7.07□□□□□ -1.28
CDH9-201ENST00000231021 DNAJC5Q9H3Z4 198 aa7.05□□□□□ -1.28
CDH9-201ENST00000231021 TRHP20396 242 aaPredicted RBP7.04□□□□□ -1.28
CDH9-201ENST00000231021 MAPK8IP2Q13387 824 aaPredicted RBP7.04□□□□□ -1.28
CDH9-201ENST00000231021 VSIG10Q8N0Z9 540 aa7.02□□□□□ -1.29
CDH9-201ENST00000231021 CFAP44Q96MT7 982 aa6.95□□□□□ -1.3
CDH9-201ENST00000231021 TSHZ2Q9NRE2 1034 aa6.94□□□□□ -1.3
CDH9-201ENST00000231021 IGSF3O75054 1194 aa6.93□□□□□ -1.3
CDH9-201ENST00000231021 ARID3AQ99856 593 aa6.92□□□□□ -1.3
CDH9-201ENST00000231021 PAXIP1Q6ZW49 1069 aaPredicted RBP6.91□□□□□ -1.3
CDH9-201ENST00000231021 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.31
CDH9-201ENST00000231021 CHMP4AQ9BY43 222 aa6.89□□□□□ -1.31
CDH9-201ENST00000231021 NPM1P06748 294 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH9-201ENST00000231021 FBXO3Q9UK99 471 aa6.84□□□□□ -1.31
CDH9-201ENST00000231021 FOXD4L1Q9NU39 408 aa6.83□□□□□ -1.32
CDH9-201ENST00000231021 SAMD1Q6SPF0 538 aaPredicted RBP6.82□□□□□ -1.32
CDH9-201ENST00000231021 ZNF428Q96B54 188 aa6.81□□□□□ -1.32
CDH9-201ENST00000231021 PKD2Q13563 968 aa6.78□□□□□ -1.32
CDH9-201ENST00000231021 NECTIN2Q92692 538 aa6.78□□□□□ -1.32
CDH9-201ENST00000231021 PDIA4P13667 645 aaKnown RBP6.77□□□□□ -1.33
CDH9-201ENST00000231021 NBR1Q14596 966 aa6.77□□□□□ -1.33
CDH9-201ENST00000231021 C1orf115Q9H7X2 142 aa6.75□□□□□ -1.33
CDH9-201ENST00000231021 NISCHQ9Y2I1 1504 aa6.74□□□□□ -1.33
CDH9-201ENST00000231021 RNF39Q9H2S5 420 aa6.73□□□□□ -1.33
CDH9-201ENST00000231021 ARID3CA6NKF2 412 aa6.72□□□□□ -1.33
CDH9-201ENST00000231021 C1QBPQ07021 282 aaKnown RBP6.71□□□□□ -1.33
CDH9-201ENST00000231021 FAM9AQ8IZU1 332 aaPredicted RBP6.67□□□□□ -1.34
CDH9-201ENST00000231021 BCL11AQ9H165 835 aa6.67□□□□□ -1.34
CDH9-201ENST00000231021 BRPF1P55201 1214 aaPredicted RBP6.67□□□□□ -1.34
CDH9-201ENST00000231021 IFNLR1Q8IU57 520 aaPredicted RBP6.66□□□□□ -1.34
CDH9-201ENST00000231021 CDK11BP21127 795 aaKnown RBP6.65□□□□□ -1.34
CDH9-201ENST00000231021 CDK11AQ9UQ88 783 aaPredicted RBP6.65□□□□□ -1.34
CDH9-201ENST00000231021 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
CDH9-201ENST00000231021 UBE2Q2Q8WVN8 375 aa6.62□□□□□ -1.35
CDH9-201ENST00000231021 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
CDH9-201ENST00000231021 DCAF8L1A6NGE4 600 aa6.61□□□□□ -1.35
CDH9-201ENST00000231021 FOXD4L5Q5VV16 416 aaPredicted RBP6.6□□□□□ -1.35
CDH9-201ENST00000231021 FOXD4L4Q8WXT5 416 aaPredicted RBP6.6□□□□□ -1.35
CDH9-201ENST00000231021 PDE4CQ08493 712 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms