RNA–Protein interactions for RNA: ENST00000231021.8

CDH9-201, Transcript of cadherin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH9, Length 3,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-201ENST00000231021 AEBP2Q6ZN18 517 aaPredicted RBP10.5□□□□□ -0.73
CDH9-201ENST00000231021 CHIC1Q5VXU3 224 aa10.28□□□□□ -0.76
CDH9-201ENST00000231021 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
CDH9-201ENST00000231021 SENP3Q9H4L4 574 aaPredicted RBP9.13□□□□□ -0.95
CDH9-201ENST00000231021 EHMT2Q96KQ7 1210 aa8.91□□□□□ -0.98
CDH9-201ENST00000231021 PHF23Q9BUL5 403 aaPredicted RBP8.89□□□□□ -0.99
CDH9-201ENST00000231021 PLPPR3Q6T4P5 718 aa8.74□□□□□ -1.01
CDH9-201ENST00000231021 RTN4Q9NQC3 1192 aaKnown RBP8.49□□□□□ -1.05
CDH9-201ENST00000231021 FOXD1Q16676 465 aa8.35□□□□□ -1.07
CDH9-201ENST00000231021 PRKCSHP14314 528 aaPredicted RBP8.27□□□□□ -1.09
CDH9-201ENST00000231021 KCNA4P22459 653 aa8.23□□□□□ -1.09
CDH9-201ENST00000231021 CSRNP3Q8WYN3 585 aa8.15□□□□□ -1.1
CDH9-201ENST00000231021 DAXXQ9UER7 740 aaPredicted RBP8.09□□□□□ -1.11
CDH9-201ENST00000231021 NCBP3Q53F19 620 aaKnown RBP8.05□□□□□ -1.12
CDH9-201ENST00000231021 MSH5O43196 834 aa7.96□□□□□ -1.14
CDH9-201ENST00000231021 TIMELESSQ9UNS1 1208 aa7.94□□□□□ -1.14
CDH9-201ENST00000231021 AMER1Q5JTC6 1135 aaPredicted RBP7.92□□□□□ -1.14
CDH9-201ENST00000231021 TULP1O00294 542 aaPredicted RBP7.8□□□□□ -1.16
CDH9-201ENST00000231021 PPP6R1Q9UPN7 881 aa7.79□□□□□ -1.16
CDH9-201ENST00000231021 PIAS4Q8N2W9 510 aaPredicted RBP7.78□□□□□ -1.16
CDH9-201ENST00000231021 ADRA2BP18089 450 aa7.76□□□□□ -1.17
CDH9-201ENST00000231021 TAOK2Q9UL54 1235 aa7.71□□□□□ -1.18
CDH9-201ENST00000231021 TPRNQ4KMQ1 711 aa7.67□□□□□ -1.18
CDH9-201ENST00000231021 KLHL34Q8N239 644 aa7.65□□□□□ -1.18
CDH9-201ENST00000231021 SLC4A1APQ9BWU0 796 aaKnown RBP7.64□□□□□ -1.19
CDH9-201ENST00000231021 APLP2Q06481 763 aa7.62□□□□□ -1.19
CDH9-201ENST00000231021 ZBTB22O15209 634 aa7.6□□□□□ -1.19
CDH9-201ENST00000231021 ARXQ96QS3 562 aa7.57□□□□□ -1.2
CDH9-201ENST00000231021 PODXL2Q9NZ53 605 aa7.5□□□□□ -1.21
CDH9-201ENST00000231021 HAP1P54257 671 aaPredicted RBP7.48□□□□□ -1.21
CDH9-201ENST00000231021 PLCB2Q00722 1185 aa7.44□□□□□ -1.22
CDH9-201ENST00000231021 BCANQ96GW7 911 aa7.44□□□□□ -1.22
CDH9-201ENST00000231021 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
CDH9-201ENST00000231021 SCAF1Q9H7N4 1312 aaKnown RBP7.39□□□□□ -1.23
CDH9-201ENST00000231021 GTF3C3Q9Y5Q9 886 aa7.39□□□□□ -1.23
CDH9-201ENST00000231021 ERICH6Q7L0X2 663 aa7.39□□□□□ -1.23
CDH9-201ENST00000231021 PLEKHG5O94827 1062 aa7.37□□□□□ -1.23
CDH9-201ENST00000231021 RANGAP1P46060 587 aaPredicted RBP7.37□□□□□ -1.23
CDH9-201ENST00000231021 POTEDQ86YR6 584 aa7.35□□□□□ -1.23
CDH9-201ENST00000231021 PELP1Q8IZL8 1130 aaKnown RBP7.35□□□□□ -1.23
CDH9-201ENST00000231021 FBLN2P98095 1184 aa7.33□□□□□ -1.24
CDH9-201ENST00000231021 SUPT5HO00267 1087 aaKnown RBP7.31□□□□□ -1.24
CDH9-201ENST00000231021 KDM2AQ9Y2K7 1162 aa7.31□□□□□ -1.24
CDH9-201ENST00000231021 FKBP8Q14318 412 aa7.3□□□□□ -1.24
CDH9-201ENST00000231021 EIF5BO60841 1220 aaKnown RBP7.29□□□□□ -1.24
CDH9-201ENST00000231021 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
CDH9-201ENST00000231021 NPM3O75607 178 aaKnown RBP7.26□□□□□ -1.25
CDH9-201ENST00000231021 TRIM26Q12899 539 aaPredicted RBP7.25□□□□□ -1.25
CDH9-201ENST00000231021 NPM2Q86SE8 214 aaKnown RBP7.24□□□□□ -1.25
CDH9-201ENST00000231021 C14orf37Q86TY3 774 aa7.24□□□□□ -1.25
CDH9-201ENST00000231021 TTBK1Q5TCY1 1321 aaPredicted RBP7.23□□□□□ -1.25
CDH9-201ENST00000231021 TMEM132AQ24JP5 1023 aa7.22□□□□□ -1.25
CDH9-201ENST00000231021 UBTFP17480 764 aaKnown RBP7.22□□□□□ -1.25
CDH9-201ENST00000231021 LOC105371045A0A1W2PR82 267 aa7.2□□□□□ -1.26
CDH9-201ENST00000231021 PPP4R3CPQ6ZMV5 832 aa7.19□□□□□ -1.26
CDH9-201ENST00000231021 DCAF8L2P0C7V8 631 aa7.17□□□□□ -1.26
CDH9-201ENST00000231021 HRCP23327 699 aa7.16□□□□□ -1.26
CDH9-201ENST00000231021 MYT1Q01538 1121 aa7.16□□□□□ -1.26
CDH9-201ENST00000231021 CNKSR2Q8WXI2 1034 aa7.14□□□□□ -1.27
CDH9-201ENST00000231021 DNAJC5BQ9UF47 199 aa7.12□□□□□ -1.27
CDH9-201ENST00000231021 HOXD11P31277 338 aaPredicted RBP7.11□□□□□ -1.27
CDH9-201ENST00000231021 RNF216Q9NWF9 866 aaPredicted RBP7.07□□□□□ -1.28
CDH9-201ENST00000231021 DNAJC5Q9H3Z4 198 aa7.05□□□□□ -1.28
CDH9-201ENST00000231021 TRHP20396 242 aaPredicted RBP7.04□□□□□ -1.28
CDH9-201ENST00000231021 MAPK8IP2Q13387 824 aaPredicted RBP7.04□□□□□ -1.28
CDH9-201ENST00000231021 VSIG10Q8N0Z9 540 aa7.02□□□□□ -1.29
CDH9-201ENST00000231021 CFAP44Q96MT7 982 aa6.95□□□□□ -1.3
CDH9-201ENST00000231021 TSHZ2Q9NRE2 1034 aa6.94□□□□□ -1.3
CDH9-201ENST00000231021 IGSF3O75054 1194 aa6.93□□□□□ -1.3
CDH9-201ENST00000231021 ARID3AQ99856 593 aa6.92□□□□□ -1.3
CDH9-201ENST00000231021 PAXIP1Q6ZW49 1069 aaPredicted RBP6.91□□□□□ -1.3
CDH9-201ENST00000231021 DHX37Q8IY37 1157 aaKnown RBP6.9□□□□□ -1.31
CDH9-201ENST00000231021 CHMP4AQ9BY43 222 aa6.89□□□□□ -1.31
CDH9-201ENST00000231021 NPM1P06748 294 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH9-201ENST00000231021 FBXO3Q9UK99 471 aa6.84□□□□□ -1.31
CDH9-201ENST00000231021 FOXD4L1Q9NU39 408 aa6.83□□□□□ -1.32
CDH9-201ENST00000231021 SAMD1Q6SPF0 538 aaPredicted RBP6.82□□□□□ -1.32
CDH9-201ENST00000231021 ZNF428Q96B54 188 aa6.81□□□□□ -1.32
CDH9-201ENST00000231021 PKD2Q13563 968 aa6.78□□□□□ -1.32
CDH9-201ENST00000231021 NECTIN2Q92692 538 aa6.78□□□□□ -1.32
CDH9-201ENST00000231021 PDIA4P13667 645 aaKnown RBP6.77□□□□□ -1.33
CDH9-201ENST00000231021 NBR1Q14596 966 aa6.77□□□□□ -1.33
CDH9-201ENST00000231021 C1orf115Q9H7X2 142 aa6.75□□□□□ -1.33
CDH9-201ENST00000231021 NISCHQ9Y2I1 1504 aa6.74□□□□□ -1.33
CDH9-201ENST00000231021 RNF39Q9H2S5 420 aa6.73□□□□□ -1.33
CDH9-201ENST00000231021 ARID3CA6NKF2 412 aa6.72□□□□□ -1.33
CDH9-201ENST00000231021 C1QBPQ07021 282 aaKnown RBP6.71□□□□□ -1.33
CDH9-201ENST00000231021 FAM9AQ8IZU1 332 aaPredicted RBP6.67□□□□□ -1.34
CDH9-201ENST00000231021 BCL11AQ9H165 835 aa6.67□□□□□ -1.34
CDH9-201ENST00000231021 BRPF1P55201 1214 aaPredicted RBP6.67□□□□□ -1.34
CDH9-201ENST00000231021 IFNLR1Q8IU57 520 aaPredicted RBP6.66□□□□□ -1.34
CDH9-201ENST00000231021 CDK11BP21127 795 aaKnown RBP6.65□□□□□ -1.34
CDH9-201ENST00000231021 CDK11AQ9UQ88 783 aaPredicted RBP6.65□□□□□ -1.34
CDH9-201ENST00000231021 IRX6P78412 446 aaPredicted RBP6.63□□□□□ -1.35
CDH9-201ENST00000231021 UBE2Q2Q8WVN8 375 aa6.62□□□□□ -1.35
CDH9-201ENST00000231021 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.62□□□□□ -1.35
CDH9-201ENST00000231021 DCAF8L1A6NGE4 600 aa6.61□□□□□ -1.35
CDH9-201ENST00000231021 FOXD4L5Q5VV16 416 aaPredicted RBP6.6□□□□□ -1.35
CDH9-201ENST00000231021 FOXD4L4Q8WXT5 416 aaPredicted RBP6.6□□□□□ -1.35
CDH9-201ENST00000231021 PDE4CQ08493 712 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms