RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 DCAF8L2P0C7V8 631 aa19.59■□□□□ 0.73
SCN5A-205ENST00000423572 FAM9AQ8IZU1 332 aaPredicted RBP18.24■□□□□ 0.51
SCN5A-205ENST00000423572 APLP2Q06481 763 aa17.65■□□□□ 0.42
SCN5A-205ENST00000423572 EHMT2Q96KQ7 1210 aa17.61■□□□□ 0.41
SCN5A-205ENST00000423572 SUPT5HO00267 1087 aaKnown RBP17.55■□□□□ 0.4
SCN5A-205ENST00000423572 PELP1Q8IZL8 1130 aaKnown RBP17.47■□□□□ 0.39
SCN5A-205ENST00000423572 ATP1B4Q9UN42 357 aaPredicted RBP17.26■□□□□ 0.35
SCN5A-205ENST00000423572 MYT1LQ9UL68 1186 aa17.2■□□□□ 0.34
SCN5A-205ENST00000423572 SHROOM4Q9ULL8 1493 aa17.16■□□□□ 0.34
SCN5A-205ENST00000423572 RANGAP1P46060 587 aaPredicted RBP17.07■□□□□ 0.32
SCN5A-205ENST00000423572 NISCHQ9Y2I1 1504 aa16.96■□□□□ 0.31
SCN5A-205ENST00000423572 TTBK1Q5TCY1 1321 aaPredicted RBP16.93■□□□□ 0.3
SCN5A-205ENST00000423572 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
SCN5A-205ENST00000423572 ERICH6Q7L0X2 663 aa16.77■□□□□ 0.28
SCN5A-205ENST00000423572 CCER1Q8TC90 406 aaPredicted RBP16.75■□□□□ 0.27
SCN5A-205ENST00000423572 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.74■□□□□ 0.27
SCN5A-205ENST00000423572 HNRNPUL2Q1KMD3 747 aaKnown RBP16.74■□□□□ 0.27
SCN5A-205ENST00000423572 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
SCN5A-205ENST00000423572 UBTFP17480 764 aaKnown RBP16.52■□□□□ 0.24
SCN5A-205ENST00000423572 POLR3GLQ9BT43 218 aa16.4■□□□□ 0.22
SCN5A-205ENST00000423572 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
SCN5A-205ENST00000423572 NEFLP07196 543 aa16.34■□□□□ 0.21
SCN5A-205ENST00000423572 DAXXQ9UER7 740 aaPredicted RBP16.32■□□□□ 0.2
SCN5A-205ENST00000423572 TRIM41Q8WV44 630 aa16.29■□□□□ 0.2
SCN5A-205ENST00000423572 BCANQ96GW7 911 aa16.28■□□□□ 0.2
SCN5A-205ENST00000423572 SLC24A1O60721 1099 aa16.23■□□□□ 0.19
SCN5A-205ENST00000423572 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
SCN5A-205ENST00000423572 ZEB1P37275 1124 aaPredicted RBP16.19■□□□□ 0.18
SCN5A-205ENST00000423572 CNGB1Q14028 1251 aaPredicted RBP16.1■□□□□ 0.17
SCN5A-205ENST00000423572 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
SCN5A-205ENST00000423572 ITGAEP38570 1179 aa16.08■□□□□ 0.16
SCN5A-205ENST00000423572 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
SCN5A-205ENST00000423572 FBLN2P98095 1184 aa16.04■□□□□ 0.16
SCN5A-205ENST00000423572 MYT1Q01538 1121 aa16■□□□□ 0.15
SCN5A-205ENST00000423572 ZBTB47Q9UFB7 747 aaPredicted RBP15.97■□□□□ 0.15
SCN5A-205ENST00000423572 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
SCN5A-205ENST00000423572 YTHDC1Q96MU7 727 aaKnown RBP15.9■□□□□ 0.14
SCN5A-205ENST00000423572 NEFMP07197 916 aa15.85■□□□□ 0.13
SCN5A-205ENST00000423572 ZNF316A6NFI3 1004 aaPredicted RBP15.8■□□□□ 0.12
SCN5A-205ENST00000423572 STAG3Q9UJ98 1225 aa15.78■□□□□ 0.12
SCN5A-205ENST00000423572 A0A0G2JS52 829 aa15.78■□□□□ 0.12
SCN5A-205ENST00000423572 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
SCN5A-205ENST00000423572 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
SCN5A-205ENST00000423572 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
SCN5A-205ENST00000423572 TRIM52Q96A61 297 aa15.71■□□□□ 0.11
SCN5A-205ENST00000423572 PPARGC1BQ86YN6 1023 aaKnown RBP15.7■□□□□ 0.1
SCN5A-205ENST00000423572 FAM50AQ14320 339 aaKnown RBP15.64■□□□□ 0.09
SCN5A-205ENST00000423572 ZNF326Q5BKZ1 582 aaKnown RBP15.6■□□□□ 0.09
SCN5A-205ENST00000423572 CANXP27824 592 aaKnown RBP15.57■□□□□ 0.08
SCN5A-205ENST00000423572 NPM2Q86SE8 214 aaKnown RBP15.56■□□□□ 0.08
SCN5A-205ENST00000423572 PABPN1Q86U42 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
SCN5A-205ENST00000423572 HAP1P54257 671 aaPredicted RBP15.48■□□□□ 0.07
SCN5A-205ENST00000423572 CHGAP10645 457 aaKnown RBP15.47■□□□□ 0.07
SCN5A-205ENST00000423572 C14orf37Q86TY3 774 aa15.47■□□□□ 0.07
SCN5A-205ENST00000423572 ABCC9O60706 1549 aa15.46■□□□□ 0.07
SCN5A-205ENST00000423572 CDK11BP21127 795 aaKnown RBP15.4■□□□□ 0.06
SCN5A-205ENST00000423572 CDK11AQ9UQ88 783 aaPredicted RBP15.4■□□□□ 0.06
SCN5A-205ENST00000423572 ARID3CA6NKF2 412 aa15.4■□□□□ 0.06
SCN5A-205ENST00000423572 ZNF777Q9ULD5 760 aaPredicted RBP15.39■□□□□ 0.05
SCN5A-205ENST00000423572 PLEKHG5O94827 1062 aa15.38■□□□□ 0.05
SCN5A-205ENST00000423572 RTL5Q5HYW3 569 aaPredicted RBP15.37■□□□□ 0.05
SCN5A-205ENST00000423572 ZBTB7CA1YPR0 619 aa15.34■□□□□ 0.05
SCN5A-205ENST00000423572 ARID4BQ4LE39 1312 aaPredicted RBP15.33■□□□□ 0.04
SCN5A-205ENST00000423572 NPHP1O15259 732 aa15.31■□□□□ 0.04
SCN5A-205ENST00000423572 NEUROD1Q13562 356 aa15.31■□□□□ 0.04
SCN5A-205ENST00000423572 TRHP20396 242 aaPredicted RBP15.28■□□□□ 0.04
SCN5A-205ENST00000423572 TRIM26Q12899 539 aaPredicted RBP15.27■□□□□ 0.03
SCN5A-205ENST00000423572 ARXQ96QS3 562 aa15.21■□□□□ 0.03
SCN5A-205ENST00000423572 PPP1R15AO75807 674 aaPredicted RBP15.2■□□□□ 0.02
SCN5A-205ENST00000423572 SENP3Q9H4L4 574 aaPredicted RBP15.17■□□□□ 0.02
SCN5A-205ENST00000423572 TULP1O00294 542 aaPredicted RBP15.15■□□□□ 0.02
SCN5A-205ENST00000423572 HSP90AA1P07900 732 aaKnown RBP15.14■□□□□ 0.01
SCN5A-205ENST00000423572 AEBP2Q6ZN18 517 aaPredicted RBP15.14■□□□□ 0.01
SCN5A-205ENST00000423572 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
SCN5A-205ENST00000423572 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.07■□□□□ 0
SCN5A-205ENST00000423572 ANP32CO43423 234 aa15.06■□□□□ 0
SCN5A-205ENST00000423572 NCBP3Q53F19 620 aaKnown RBP15.05■□□□□ 0
SCN5A-205ENST00000423572 ANP32BQ92688 251 aaKnown RBP15.03■□□□□ -0
SCN5A-205ENST00000423572 LMOD2Q6P5Q4 547 aa15.03■□□□□ -0
SCN5A-205ENST00000423572 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
SCN5A-205ENST00000423572 UPF2Q9HAU5 1272 aaKnown RBP14.92□□□□□ -0.02
SCN5A-205ENST00000423572 MYH16Q9H6N6 1097 aa14.92□□□□□ -0.02
SCN5A-205ENST00000423572 DCAF8L1A6NGE4 600 aa14.91□□□□□ -0.02
SCN5A-205ENST00000423572 GOLGA2Q08379 1002 aa14.9□□□□□ -0.02
SCN5A-205ENST00000423572 KRI1Q8N9T8 703 aaKnown RBP14.89□□□□□ -0.03
SCN5A-205ENST00000423572 HRCP23327 699 aa14.88□□□□□ -0.03
SCN5A-205ENST00000423572 TMX4Q9H1E5 349 aaPredicted RBP14.88□□□□□ -0.03
SCN5A-205ENST00000423572 KCNH8Q96L42 1107 aa14.87□□□□□ -0.03
SCN5A-205ENST00000423572 CLSTN1O94985 981 aa14.86□□□□□ -0.03
SCN5A-205ENST00000423572 TSPY4P0CV99 314 aa14.84□□□□□ -0.03
SCN5A-205ENST00000423572 TSPY10P0CW01 314 aa14.84□□□□□ -0.03
SCN5A-205ENST00000423572 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
SCN5A-205ENST00000423572 DIEXFQ68CQ4 756 aaKnown RBP14.79□□□□□ -0.04
SCN5A-205ENST00000423572 WDR43Q15061 677 aaKnown RBP eCLIP14.79□□□□□ -0.04
SCN5A-205ENST00000423572 EIF4G2P78344 907 aaKnown RBP eCLIP14.78□□□□□ -0.04
SCN5A-205ENST00000423572 LOC105371045A0A1W2PR82 267 aa14.78□□□□□ -0.04
SCN5A-205ENST00000423572 ISY1Q9ULR0 285 aaKnown RBP14.77□□□□□ -0.05
SCN5A-205ENST00000423572 CCDC9Q9Y3X0 531 aaKnown RBP14.77□□□□□ -0.05
SCN5A-205ENST00000423572 PHF23Q9BUL5 403 aaPredicted RBP14.75□□□□□ -0.05
SCN5A-205ENST00000423572 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms