RNA–Protein interactions for RNA: ENST00000408671.3

MIR1249-201, Transcript of microRNA 1249, humanhuman

BASIC

Gene MIR1249, Length 66 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR1249-201ENST00000408671 NISCHQ9Y2I1 1504 aa29.53■■■□□ 2.32
MIR1249-201ENST00000408671 ABCC9O60706 1549 aa27.3■■□□□ 1.96
MIR1249-201ENST00000408671 CCDC180Q9P1Z9 1646 aa26.87■■□□□ 1.89
MIR1249-201ENST00000408671 DNAJC5BQ9UF47 199 aa26.16■■□□□ 1.78
MIR1249-201ENST00000408671 RB1CC1Q8TDY2 1594 aa25.78■■□□□ 1.72
MIR1249-201ENST00000408671 NACADO15069 1562 aa25.48■■□□□ 1.67
MIR1249-201ENST00000408671 UNC13AQ9UPW8 1703 aa25.32■■□□□ 1.64
MIR1249-201ENST00000408671 PABPN1Q86U42 306 aaKnown RBP eCLIP25.23■■□□□ 1.63
MIR1249-201ENST00000408671 BICRAQ9NZM4 1560 aa25.12■■□□□ 1.61
MIR1249-201ENST00000408671 MYO15BQ96JP2 1530 aa24.98■■□□□ 1.59
MIR1249-201ENST00000408671 DCAF8L2P0C7V8 631 aa24.92■■□□□ 1.58
MIR1249-201ENST00000408671 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
MIR1249-201ENST00000408671 CC2D2AQ9P2K1 1620 aa24.71■■□□□ 1.55
MIR1249-201ENST00000408671 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
MIR1249-201ENST00000408671 EIF4G1Q04637 1599 aaKnown RBP24.51■■□□□ 1.51
MIR1249-201ENST00000408671 DNAJC5Q9H3Z4 198 aa24.47■■□□□ 1.51
MIR1249-201ENST00000408671 DCAF1Q9Y4B6 1507 aa24.41■■□□□ 1.5
MIR1249-201ENST00000408671 ZCCHC6Q5VYS8 1495 aaKnown RBP24.37■■□□□ 1.49
MIR1249-201ENST00000408671 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
MIR1249-201ENST00000408671 CUX2O14529 1486 aa23.85■■□□□ 1.41
MIR1249-201ENST00000408671 ERCC6Q03468 1493 aa23.58■■□□□ 1.37
MIR1249-201ENST00000408671 NCAPD3P42695 1498 aa23.51■■□□□ 1.35
MIR1249-201ENST00000408671 ATAD2BQ9ULI0 1458 aa23.34■■□□□ 1.33
MIR1249-201ENST00000408671 HMGXB3Q12766 1538 aa23.33■■□□□ 1.32
MIR1249-201ENST00000408671 THOC2Q8NI27 1593 aaKnown RBP23.3■■□□□ 1.32
MIR1249-201ENST00000408671 NESP48681 1621 aa23.3■■□□□ 1.32
MIR1249-201ENST00000408671 SMARCA2P51531 1590 aa23.25■■□□□ 1.31
MIR1249-201ENST00000408671 SMARCA4P51532 1647 aa23.19■■□□□ 1.3
MIR1249-201ENST00000408671 LAMC3Q9Y6N6 1575 aa23.1■■□□□ 1.29
MIR1249-201ENST00000408671 KIF21AQ7Z4S6 1674 aa23.06■■□□□ 1.28
MIR1249-201ENST00000408671 BAZ1BQ9UIG0 1483 aaKnown RBP23.05■■□□□ 1.28
MIR1249-201ENST00000408671 PEG3Q9GZU2 1588 aa23.03■■□□□ 1.28
MIR1249-201ENST00000408671 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
MIR1249-201ENST00000408671 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
MIR1249-201ENST00000408671 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
MIR1249-201ENST00000408671 WDR62O43379 1518 aa22.81■■□□□ 1.24
MIR1249-201ENST00000408671 MRC2Q9UBG0 1479 aa22.79■■□□□ 1.24
MIR1249-201ENST00000408671 MROH2BQ7Z745 1585 aa22.72■■□□□ 1.23
MIR1249-201ENST00000408671 CADPSQ9ULU8 1353 aa22.71■■□□□ 1.23
MIR1249-201ENST00000408671 CEP164Q9UPV0 1460 aa22.55■■□□□ 1.2
MIR1249-201ENST00000408671 OSCARQ8IYS5 282 aa22.54■■□□□ 1.2
MIR1249-201ENST00000408671 FANCD2Q9BXW9 1451 aa22.47■■□□□ 1.19
MIR1249-201ENST00000408671 RIMBP3CA6NJZ7 1639 aa22.44■■□□□ 1.18
MIR1249-201ENST00000408671 RIMBP3BA6NNM3 1639 aa22.44■■□□□ 1.18
MIR1249-201ENST00000408671 WIZO95785 1651 aa22.44■■□□□ 1.18
MIR1249-201ENST00000408671 RIMBP3Q9UFD9 1639 aa22.44■■□□□ 1.18
MIR1249-201ENST00000408671 CFTRP13569 1480 aa22.38■■□□□ 1.17
MIR1249-201ENST00000408671 URB2Q14146 1524 aaKnown RBP22.36■■□□□ 1.17
MIR1249-201ENST00000408671 ARHGEF11O15085 1522 aa22.29■■□□□ 1.16
MIR1249-201ENST00000408671 PRDM2Q13029 1718 aa22.22■■□□□ 1.15
MIR1249-201ENST00000408671 ZNF608Q9ULD9 1512 aaPredicted RBP22.16■■□□□ 1.14
MIR1249-201ENST00000408671 IFT140Q96RY7 1462 aa22.13■■□□□ 1.13
MIR1249-201ENST00000408671 TOP2AP11388 1531 aaKnown RBP22.12■■□□□ 1.13
MIR1249-201ENST00000408671 EIF4G3O43432 1585 aaKnown RBP22.06■■□□□ 1.12
MIR1249-201ENST00000408671 CHD1O14646 1710 aa22.03■■□□□ 1.12
MIR1249-201ENST00000408671 ARAP1Q96P48 1450 aa22.03■■□□□ 1.12
MIR1249-201ENST00000408671 CYB5RLQ6IPT4 315 aa22.02■■□□□ 1.12
MIR1249-201ENST00000408671 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
MIR1249-201ENST00000408671 TOPBP1Q92547 1522 aa22■■□□□ 1.11
MIR1249-201ENST00000408671 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
MIR1249-201ENST00000408671 TARBP1Q13395 1621 aaKnown RBP21.91■■□□□ 1.1
MIR1249-201ENST00000408671 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
MIR1249-201ENST00000408671 DNMBPQ6XZF7 1577 aa21.89■■□□□ 1.09
MIR1249-201ENST00000408671 AQRO60306 1485 aaKnown RBP eCLIP21.83■■□□□ 1.09
MIR1249-201ENST00000408671 CCDC88BA6NC98 1476 aa21.83■■□□□ 1.08
MIR1249-201ENST00000408671 CLASP1Q7Z460 1538 aa21.76■■□□□ 1.07
MIR1249-201ENST00000408671 POLA1P09884 1462 aaPredicted RBP21.73■■□□□ 1.07
MIR1249-201ENST00000408671 AEBP2Q6ZN18 517 aaPredicted RBP21.73■■□□□ 1.07
MIR1249-201ENST00000408671 FBLN2P98095 1184 aa21.69■■□□□ 1.06
MIR1249-201ENST00000408671 WDR97A6NE52 1622 aa21.67■■□□□ 1.06
MIR1249-201ENST00000408671 SYNJ1O43426 1573 aa21.64■■□□□ 1.05
MIR1249-201ENST00000408671 SNAPC4Q5SXM2 1469 aa21.62■■□□□ 1.05
MIR1249-201ENST00000408671 RAD54L2Q9Y4B4 1467 aa21.62■■□□□ 1.05
MIR1249-201ENST00000408671 TDRD9Q8NDG6 1382 aaKnown RBP21.58■■□□□ 1.04
MIR1249-201ENST00000408671 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.04
MIR1249-201ENST00000408671 SOGA1O94964 1423 aa21.55■■□□□ 1.04
MIR1249-201ENST00000408671 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
MIR1249-201ENST00000408671 GAPVD1Q14C86 1478 aa21.5■■□□□ 1.03
MIR1249-201ENST00000408671 FGD5Q6ZNL6 1462 aa21.49■■□□□ 1.03
MIR1249-201ENST00000408671 GRIN2BQ13224 1484 aa21.48■■□□□ 1.03
MIR1249-201ENST00000408671 CHMP7Q8WUX9 453 aaPredicted RBP21.48■■□□□ 1.03
MIR1249-201ENST00000408671 PBRM1Q86U86 1689 aa21.44■■□□□ 1.02
MIR1249-201ENST00000408671 CUX1P39880 1505 aa21.4■■□□□ 1.02
MIR1249-201ENST00000408671 ERCC6L2Q5T890 1561 aa21.34■■□□□ 1.01
MIR1249-201ENST00000408671 KIF13AQ9H1H9 1805 aa21.32■■□□□ 1
MIR1249-201ENST00000408671 ABCA5Q8WWZ7 1642 aa21.32■■□□□ 1
MIR1249-201ENST00000408671 CEP170Q5SW79 1584 aa21.25■□□□□ 0.99
MIR1249-201ENST00000408671 SHROOM2Q13796 1616 aa21.25■□□□□ 0.99
MIR1249-201ENST00000408671 ABCA10Q8WWZ4 1543 aa21.24■□□□□ 0.99
MIR1249-201ENST00000408671 GRIN2AQ12879 1464 aa21.23■□□□□ 0.99
MIR1249-201ENST00000408671 NUP160Q12769 1436 aa21.21■□□□□ 0.99
MIR1249-201ENST00000408671 ADAMTS12P58397 1594 aa21.18■□□□□ 0.98
MIR1249-201ENST00000408671 ABCC10Q5T3U5 1492 aa21.04■□□□□ 0.96
MIR1249-201ENST00000408671 FHAD1B1AJZ9 1412 aa21.02■□□□□ 0.96
MIR1249-201ENST00000408671 MAPKBP1O60336 1514 aa21.01■□□□□ 0.95
MIR1249-201ENST00000408671 DIP2BQ9P265 1576 aa21.01■□□□□ 0.95
MIR1249-201ENST00000408671 ERICH3Q5RHP9 1530 aa20.97■□□□□ 0.95
MIR1249-201ENST00000408671 WRNQ14191 1432 aaPredicted RBP eCLIP20.96■□□□□ 0.95
MIR1249-201ENST00000408671 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
MIR1249-201ENST00000408671 KDM4FA0A1W2PPD8 638 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms