RNA–Protein interactions for RNA: ENST00000514170.5

CNGA1-207, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CNGA1, Length 2,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-207ENST00000514170 NISCHQ9Y2I1 1504 aa11.83□□□□□ -0.52
CNGA1-207ENST00000514170 DCAF8L2P0C7V8 631 aa10.66□□□□□ -0.7
CNGA1-207ENST00000514170 ABCC9O60706 1549 aa10.49□□□□□ -0.73
CNGA1-207ENST00000514170 AEBP2Q6ZN18 517 aaPredicted RBP10.32□□□□□ -0.76
CNGA1-207ENST00000514170 SHROOM4Q9ULL8 1493 aa10.21□□□□□ -0.78
CNGA1-207ENST00000514170 CCDC180Q9P1Z9 1646 aa10.16□□□□□ -0.78
CNGA1-207ENST00000514170 PABPN1Q86U42 306 aaKnown RBP eCLIP10.03□□□□□ -0.8
CNGA1-207ENST00000514170 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.81
CNGA1-207ENST00000514170 ZCCHC6Q5VYS8 1495 aaKnown RBP9.84□□□□□ -0.83
CNGA1-207ENST00000514170 SCRIBQ14160 1630 aa9.84□□□□□ -0.83
CNGA1-207ENST00000514170 MYT1Q01538 1121 aa9.76□□□□□ -0.85
CNGA1-207ENST00000514170 RB1CC1Q8TDY2 1594 aa9.7□□□□□ -0.86
CNGA1-207ENST00000514170 SUPT5HO00267 1087 aaKnown RBP9.67□□□□□ -0.86
CNGA1-207ENST00000514170 NACADO15069 1562 aa9.62□□□□□ -0.87
CNGA1-207ENST00000514170 POTEDQ86YR6 584 aa9.61□□□□□ -0.87
CNGA1-207ENST00000514170 DNAJC5BQ9UF47 199 aa9.58□□□□□ -0.88
CNGA1-207ENST00000514170 UNC13AQ9UPW8 1703 aa9.56□□□□□ -0.88
CNGA1-207ENST00000514170 CHIC1Q5VXU3 224 aa9.52□□□□□ -0.88
CNGA1-207ENST00000514170 CECR2Q9BXF3 1484 aa9.47□□□□□ -0.89
CNGA1-207ENST00000514170 BICRAQ9NZM4 1560 aa9.46□□□□□ -0.89
CNGA1-207ENST00000514170 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
CNGA1-207ENST00000514170 HRCP23327 699 aa9.41□□□□□ -0.9
CNGA1-207ENST00000514170 TTBK1Q5TCY1 1321 aaPredicted RBP9.36□□□□□ -0.91
CNGA1-207ENST00000514170 MYO15BQ96JP2 1530 aa9.35□□□□□ -0.91
CNGA1-207ENST00000514170 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
CNGA1-207ENST00000514170 EIF4G1Q04637 1599 aaKnown RBP9.27□□□□□ -0.93
CNGA1-207ENST00000514170 EHMT2Q96KQ7 1210 aa9.25□□□□□ -0.93
CNGA1-207ENST00000514170 CC2D2AQ9P2K1 1620 aa9.25□□□□□ -0.93
CNGA1-207ENST00000514170 WIZO95785 1651 aa9.23□□□□□ -0.93
CNGA1-207ENST00000514170 SCAF1Q9H7N4 1312 aaKnown RBP9.23□□□□□ -0.93
CNGA1-207ENST00000514170 RSF1Q96T23 1441 aaPredicted RBP9.2□□□□□ -0.94
CNGA1-207ENST00000514170 PRKCSHP14314 528 aaPredicted RBP9.18□□□□□ -0.94
CNGA1-207ENST00000514170 PPARGC1BQ86YN6 1023 aaKnown RBP9.16□□□□□ -0.94
CNGA1-207ENST00000514170 SMARCA4P51532 1647 aa9.16□□□□□ -0.94
CNGA1-207ENST00000514170 BAZ1BQ9UIG0 1483 aaKnown RBP9.13□□□□□ -0.95
CNGA1-207ENST00000514170 BAZ1AQ9NRL2 1556 aaPredicted RBP9.12□□□□□ -0.95
CNGA1-207ENST00000514170 ATAD2BQ9ULI0 1458 aa9.12□□□□□ -0.95
CNGA1-207ENST00000514170 NESP48681 1621 aa9.11□□□□□ -0.95
CNGA1-207ENST00000514170 FAM9AQ8IZU1 332 aaPredicted RBP9.06□□□□□ -0.96
CNGA1-207ENST00000514170 BCL11AQ9H165 835 aa9.04□□□□□ -0.96
CNGA1-207ENST00000514170 CCDC88BA6NC98 1476 aa8.98□□□□□ -0.97
CNGA1-207ENST00000514170 SMARCA2P51531 1590 aa8.98□□□□□ -0.97
CNGA1-207ENST00000514170 ERCC6Q03468 1493 aa8.98□□□□□ -0.97
CNGA1-207ENST00000514170 RANGAP1P46060 587 aaPredicted RBP8.97□□□□□ -0.97
CNGA1-207ENST00000514170 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
CNGA1-207ENST00000514170 PCGF6Q9BYE7 350 aa8.94□□□□□ -0.98
CNGA1-207ENST00000514170 APLP2Q06481 763 aa8.94□□□□□ -0.98
CNGA1-207ENST00000514170 ERICH6Q7L0X2 663 aa8.93□□□□□ -0.98
CNGA1-207ENST00000514170 TOP2AP11388 1531 aaKnown RBP8.91□□□□□ -0.98
CNGA1-207ENST00000514170 ABCC8Q09428 1581 aa8.91□□□□□ -0.98
CNGA1-207ENST00000514170 FBLN2P98095 1184 aa8.88□□□□□ -0.99
CNGA1-207ENST00000514170 TRIM41Q8WV44 630 aa8.87□□□□□ -0.99
CNGA1-207ENST00000514170 CADPSQ9ULU8 1353 aa8.85□□□□□ -0.99
CNGA1-207ENST00000514170 HMGXB3Q12766 1538 aa8.85□□□□□ -0.99
CNGA1-207ENST00000514170 ZEB1P37275 1124 aaPredicted RBP8.84□□□□□ -0.99
CNGA1-207ENST00000514170 FANCD2Q9BXW9 1451 aa8.82□□□□□ -1
CNGA1-207ENST00000514170 PEG3Q9GZU2 1588 aa8.81□□□□□ -1
CNGA1-207ENST00000514170 ACIN1Q9UKV3 1341 aaKnown RBP8.81□□□□□ -1
CNGA1-207ENST00000514170 CENPBP07199 599 aaPredicted RBP8.81□□□□□ -1
CNGA1-207ENST00000514170 KIF21AQ7Z4S6 1674 aa8.8□□□□□ -1
CNGA1-207ENST00000514170 TDRD9Q8NDG6 1382 aaKnown RBP8.77□□□□□ -1.01
CNGA1-207ENST00000514170 CEP164Q9UPV0 1460 aa8.76□□□□□ -1.01
CNGA1-207ENST00000514170 RAD54L2Q9Y4B4 1467 aa8.76□□□□□ -1.01
CNGA1-207ENST00000514170 NEUROD1Q13562 356 aa8.76□□□□□ -1.01
CNGA1-207ENST00000514170 GTF3C3Q9Y5Q9 886 aa8.76□□□□□ -1.01
CNGA1-207ENST00000514170 PDS5BQ9NTI5 1447 aa8.75□□□□□ -1.01
CNGA1-207ENST00000514170 CFTRP13569 1480 aa8.74□□□□□ -1.01
CNGA1-207ENST00000514170 LOC105371045A0A1W2PR82 267 aa8.74□□□□□ -1.01
CNGA1-207ENST00000514170 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
CNGA1-207ENST00000514170 URB2Q14146 1524 aaKnown RBP8.71□□□□□ -1.02
CNGA1-207ENST00000514170 WRNQ14191 1432 aaPredicted RBP eCLIP8.71□□□□□ -1.02
CNGA1-207ENST00000514170 ARID3CA6NKF2 412 aa8.7□□□□□ -1.02
CNGA1-207ENST00000514170 AQRO60306 1485 aaKnown RBP eCLIP8.7□□□□□ -1.02
CNGA1-207ENST00000514170 RUSC2Q8N2Y8 1516 aa8.69□□□□□ -1.02
CNGA1-207ENST00000514170 ZNF608Q9ULD9 1512 aaPredicted RBP8.69□□□□□ -1.02
CNGA1-207ENST00000514170 SYNJ1O43426 1573 aa8.68□□□□□ -1.02
CNGA1-207ENST00000514170 SLC24A1O60721 1099 aa8.67□□□□□ -1.02
CNGA1-207ENST00000514170 SOGA1O94964 1423 aa8.67□□□□□ -1.02
CNGA1-207ENST00000514170 LAMC3Q9Y6N6 1575 aa8.67□□□□□ -1.02
CNGA1-207ENST00000514170 CUX1P39880 1505 aa8.67□□□□□ -1.02
CNGA1-207ENST00000514170 FGD5Q6ZNL6 1462 aa8.66□□□□□ -1.02
CNGA1-207ENST00000514170 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
CNGA1-207ENST00000514170 TOPBP1Q92547 1522 aa8.64□□□□□ -1.03
CNGA1-207ENST00000514170 ANP32EQ9BTT0 268 aa8.64□□□□□ -1.03
CNGA1-207ENST00000514170 MRC2Q9UBG0 1479 aa8.64□□□□□ -1.03
CNGA1-207ENST00000514170 UBTFP17480 764 aaKnown RBP8.63□□□□□ -1.03
CNGA1-207ENST00000514170 CUX2O14529 1486 aa8.63□□□□□ -1.03
CNGA1-207ENST00000514170 POLA1P09884 1462 aaPredicted RBP8.63□□□□□ -1.03
CNGA1-207ENST00000514170 PHF23Q9BUL5 403 aaPredicted RBP8.62□□□□□ -1.03
CNGA1-207ENST00000514170 ATP1B4Q9UN42 357 aaPredicted RBP8.61□□□□□ -1.03
CNGA1-207ENST00000514170 CHMP7Q8WUX9 453 aaPredicted RBP8.6□□□□□ -1.03
CNGA1-207ENST00000514170 SENP3Q9H4L4 574 aaPredicted RBP8.6□□□□□ -1.03
CNGA1-207ENST00000514170 THOC2Q8NI27 1593 aaKnown RBP8.59□□□□□ -1.03
CNGA1-207ENST00000514170 CSRNP3Q8WYN3 585 aa8.57□□□□□ -1.04
CNGA1-207ENST00000514170 DNMBPQ6XZF7 1577 aa8.53□□□□□ -1.04
CNGA1-207ENST00000514170 WDR62O43379 1518 aa8.51□□□□□ -1.05
CNGA1-207ENST00000514170 SNAPC4Q5SXM2 1469 aa8.51□□□□□ -1.05
CNGA1-207ENST00000514170 GAPVD1Q14C86 1478 aa8.5□□□□□ -1.05
CNGA1-207ENST00000514170 CYB5RLQ6IPT4 315 aa8.49□□□□□ -1.05
CNGA1-207ENST00000514170 TOP2BQ02880 1626 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms