RNA–Protein interactions for RNA: ENST00000543906.5

RAB6B-207, Transcript of RAB6B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB6B, Length 5,219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6B-207ENST00000543906 DCAF8L2P0C7V8 631 aa19.95■□□□□ 0.78
RAB6B-207ENST00000543906 NISCHQ9Y2I1 1504 aa19.49■□□□□ 0.71
RAB6B-207ENST00000543906 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
RAB6B-207ENST00000543906 SUPT5HO00267 1087 aaKnown RBP17.96■□□□□ 0.47
RAB6B-207ENST00000543906 ABCC9O60706 1549 aa17.56■□□□□ 0.4
RAB6B-207ENST00000543906 FAM9AQ8IZU1 332 aaPredicted RBP17.56■□□□□ 0.4
RAB6B-207ENST00000543906 EHMT2Q96KQ7 1210 aa17.24■□□□□ 0.35
RAB6B-207ENST00000543906 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
RAB6B-207ENST00000543906 APLP2Q06481 763 aa17.06■□□□□ 0.32
RAB6B-207ENST00000543906 RANGAP1P46060 587 aaPredicted RBP16.88■□□□□ 0.29
RAB6B-207ENST00000543906 ATP1B4Q9UN42 357 aaPredicted RBP16.86■□□□□ 0.29
RAB6B-207ENST00000543906 TRIM41Q8WV44 630 aa16.77■□□□□ 0.27
RAB6B-207ENST00000543906 TTBK1Q5TCY1 1321 aaPredicted RBP16.69■□□□□ 0.26
RAB6B-207ENST00000543906 UBTFP17480 764 aaKnown RBP16.64■□□□□ 0.25
RAB6B-207ENST00000543906 MYT1LQ9UL68 1186 aa16.6■□□□□ 0.25
RAB6B-207ENST00000543906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
RAB6B-207ENST00000543906 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
RAB6B-207ENST00000543906 FBLN2P98095 1184 aa16.5■□□□□ 0.23
RAB6B-207ENST00000543906 CCDC180Q9P1Z9 1646 aa16.37■□□□□ 0.21
RAB6B-207ENST00000543906 RB1CC1Q8TDY2 1594 aa16.35■□□□□ 0.21
RAB6B-207ENST00000543906 SCRIBQ14160 1630 aa16.35■□□□□ 0.21
RAB6B-207ENST00000543906 CHIC1Q5VXU3 224 aa16.08■□□□□ 0.16
RAB6B-207ENST00000543906 NACADO15069 1562 aa16.08■□□□□ 0.16
RAB6B-207ENST00000543906 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
RAB6B-207ENST00000543906 ZCCHC6Q5VYS8 1495 aaKnown RBP16.01■□□□□ 0.15
RAB6B-207ENST00000543906 ERCC6Q03468 1493 aa15.96■□□□□ 0.15
RAB6B-207ENST00000543906 ITGAEP38570 1179 aa15.89■□□□□ 0.13
RAB6B-207ENST00000543906 CHMP7Q8WUX9 453 aaPredicted RBP15.88■□□□□ 0.13
RAB6B-207ENST00000543906 ESF1Q9H501 851 aaKnown RBP15.84■□□□□ 0.13
RAB6B-207ENST00000543906 PCGF6Q9BYE7 350 aa15.82■□□□□ 0.12
RAB6B-207ENST00000543906 ARID3CA6NKF2 412 aa15.78■□□□□ 0.12
RAB6B-207ENST00000543906 PPARGC1BQ86YN6 1023 aaKnown RBP15.75■□□□□ 0.11
RAB6B-207ENST00000543906 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
RAB6B-207ENST00000543906 CDK11AQ9UQ88 783 aaPredicted RBP15.73■□□□□ 0.11
RAB6B-207ENST00000543906 BAZ1BQ9UIG0 1483 aaKnown RBP15.73■□□□□ 0.11
RAB6B-207ENST00000543906 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
RAB6B-207ENST00000543906 TRHP20396 242 aaPredicted RBP15.68■□□□□ 0.1
RAB6B-207ENST00000543906 CCER1Q8TC90 406 aaPredicted RBP15.67■□□□□ 0.1
RAB6B-207ENST00000543906 BCANQ96GW7 911 aa15.67■□□□□ 0.1
RAB6B-207ENST00000543906 FAM50AQ14320 339 aaKnown RBP15.65■□□□□ 0.1
RAB6B-207ENST00000543906 ZNF777Q9ULD5 760 aaPredicted RBP15.6■□□□□ 0.09
RAB6B-207ENST00000543906 CSRNP3Q8WYN3 585 aa15.57■□□□□ 0.08
RAB6B-207ENST00000543906 SLC4A1APQ9BWU0 796 aaKnown RBP15.57■□□□□ 0.08
RAB6B-207ENST00000543906 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
RAB6B-207ENST00000543906 TRIM52Q96A61 297 aa15.56■□□□□ 0.08
RAB6B-207ENST00000543906 LOC105371045A0A1W2PR82 267 aa15.53■□□□□ 0.08
RAB6B-207ENST00000543906 POLR3GLQ9BT43 218 aa15.53■□□□□ 0.08
RAB6B-207ENST00000543906 STAG3Q9UJ98 1225 aa15.49■□□□□ 0.07
RAB6B-207ENST00000543906 PDS5BQ9NTI5 1447 aa15.48■□□□□ 0.07
RAB6B-207ENST00000543906 DCAF1Q9Y4B6 1507 aa15.45■□□□□ 0.06
RAB6B-207ENST00000543906 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
RAB6B-207ENST00000543906 KCNH8Q96L42 1107 aa15.42■□□□□ 0.06
RAB6B-207ENST00000543906 ARID4BQ4LE39 1312 aaPredicted RBP15.41■□□□□ 0.06
RAB6B-207ENST00000543906 SMARCA2P51531 1590 aa15.34■□□□□ 0.05
RAB6B-207ENST00000543906 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
RAB6B-207ENST00000543906 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
RAB6B-207ENST00000543906 PLEKHD1A6NEE1 506 aa15.31■□□□□ 0.04
RAB6B-207ENST00000543906 ZEB1P37275 1124 aaPredicted RBP15.3■□□□□ 0.04
RAB6B-207ENST00000543906 TSPY4P0CV99 314 aa15.26■□□□□ 0.03
RAB6B-207ENST00000543906 TSPY10P0CW01 314 aa15.26■□□□□ 0.03
RAB6B-207ENST00000543906 ZNF326Q5BKZ1 582 aaKnown RBP15.26■□□□□ 0.03
RAB6B-207ENST00000543906 MYO15BQ96JP2 1530 aa15.25■□□□□ 0.03
RAB6B-207ENST00000543906 CNGB1Q14028 1251 aaPredicted RBP15.22■□□□□ 0.03
RAB6B-207ENST00000543906 WRNQ14191 1432 aaPredicted RBP eCLIP15.22■□□□□ 0.039e-6■■■■■ 50.1
RAB6B-207ENST00000543906 PELP1Q8IZL8 1130 aaKnown RBP15.2■□□□□ 0.02
RAB6B-207ENST00000543906 KIF27Q86VH2 1401 aa15.2■□□□□ 0.02
RAB6B-207ENST00000543906 TRIM26Q12899 539 aaPredicted RBP15.2■□□□□ 0.02
RAB6B-207ENST00000543906 OSCARQ8IYS5 282 aa15.19■□□□□ 0.02
RAB6B-207ENST00000543906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.19■□□□□ 0.02
RAB6B-207ENST00000543906 CADPSQ9ULU8 1353 aa15.17■□□□□ 0.02
RAB6B-207ENST00000543906 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
RAB6B-207ENST00000543906 MTUS2Q5JR59 1369 aa15.15■□□□□ 0.02
RAB6B-207ENST00000543906 NEUROD1Q13562 356 aa15.12■□□□□ 0.01
RAB6B-207ENST00000543906 C14orf37Q86TY3 774 aa15.11■□□□□ 0.01
RAB6B-207ENST00000543906 CYB5RLQ6IPT4 315 aa15.1■□□□□ 0.01
RAB6B-207ENST00000543906 PPP1R15AO75807 674 aaPredicted RBP15.1■□□□□ 0.01
RAB6B-207ENST00000543906 CEP164Q9UPV0 1460 aa15.09■□□□□ 0.01
RAB6B-207ENST00000543906 SOGA1O94964 1423 aa15.09■□□□□ 0.01
RAB6B-207ENST00000543906 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
RAB6B-207ENST00000543906 CUX2O14529 1486 aa15.07■□□□□ 0
RAB6B-207ENST00000543906 ATAD2BQ9ULI0 1458 aa15.06■□□□□ 0
RAB6B-207ENST00000543906 CARMIL2Q6F5E8 1435 aa15.05■□□□□ -0
RAB6B-207ENST00000543906 CHIC2Q9UKJ5 165 aa15.04■□□□□ -0
RAB6B-207ENST00000543906 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
RAB6B-207ENST00000543906 EIF4G1Q04637 1599 aaKnown RBP15.04■□□□□ -0
RAB6B-207ENST00000543906 SLC24A1O60721 1099 aa15.02■□□□□ -0
RAB6B-207ENST00000543906 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
RAB6B-207ENST00000543906 MLECQ14165 292 aa15.02■□□□□ -0
RAB6B-207ENST00000543906 CFDP1Q9UEE9 299 aaPredicted RBP15□□□□□ -0.01
RAB6B-207ENST00000543906 CARMIL1Q5VZK9 1371 aa14.99□□□□□ -0.01
RAB6B-207ENST00000543906 EEA1Q15075 1411 aa14.98□□□□□ -0.01
RAB6B-207ENST00000543906 NEFMP07197 916 aa14.96□□□□□ -0.01
RAB6B-207ENST00000543906 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
RAB6B-207ENST00000543906 CCDC88BA6NC98 1476 aa14.93□□□□□ -0.02
RAB6B-207ENST00000543906 HAP1P54257 671 aaPredicted RBP14.92□□□□□ -0.02
RAB6B-207ENST00000543906 DNAJC5BQ9UF47 199 aa14.92□□□□□ -0.02
RAB6B-207ENST00000543906 CLIP1P30622 1438 aa14.91□□□□□ -0.02
RAB6B-207ENST00000543906 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
RAB6B-207ENST00000543906 ABCC8Q09428 1581 aa14.89□□□□□ -0.03
RAB6B-207ENST00000543906 NEFLP07196 543 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms