RNA–Protein interactions for RNA: ENST00000265724.7

ABCB1-201, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,645 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-201ENST00000265724 NISCHQ9Y2I1 1504 aa17.97■□□□□ 0.47
ABCB1-201ENST00000265724 DCAF8L2P0C7V8 631 aa17.57■□□□□ 0.4
ABCB1-201ENST00000265724 SUPT5HO00267 1087 aaKnown RBP16.76■□□□□ 0.27
ABCB1-201ENST00000265724 SHROOM4Q9ULL8 1493 aa16.72■□□□□ 0.27
ABCB1-201ENST00000265724 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
ABCB1-201ENST00000265724 FAM9AQ8IZU1 332 aaPredicted RBP15.73■□□□□ 0.11
ABCB1-201ENST00000265724 TRIM41Q8WV44 630 aa15.54■□□□□ 0.08
ABCB1-201ENST00000265724 APLP2Q06481 763 aa15.44■□□□□ 0.06
ABCB1-201ENST00000265724 PCGF6Q9BYE7 350 aa15.42■□□□□ 0.06
ABCB1-201ENST00000265724 TTBK1Q5TCY1 1321 aaPredicted RBP15.38■□□□□ 0.05
ABCB1-201ENST00000265724 RANGAP1P46060 587 aaPredicted RBP15.3■□□□□ 0.04
ABCB1-201ENST00000265724 ABCC9O60706 1549 aa15.29■□□□□ 0.04
ABCB1-201ENST00000265724 UBTFP17480 764 aaKnown RBP15.22■□□□□ 0.03
ABCB1-201ENST00000265724 CHIC1Q5VXU3 224 aa15.21■□□□□ 0.03
ABCB1-201ENST00000265724 LOC105371045A0A1W2PR82 267 aa15.08■□□□□ 0
ABCB1-201ENST00000265724 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ 0
ABCB1-201ENST00000265724 ATP1B4Q9UN42 357 aaPredicted RBP15.04■□□□□ -0
ABCB1-201ENST00000265724 PPARGC1BQ86YN6 1023 aaKnown RBP15.03■□□□□ -0
ABCB1-201ENST00000265724 CCER1Q8TC90 406 aaPredicted RBP15□□□□□ -0.01
ABCB1-201ENST00000265724 ZEB1P37275 1124 aaPredicted RBP14.94□□□□□ -0.02
ABCB1-201ENST00000265724 ZCCHC6Q5VYS8 1495 aaKnown RBP14.93□□□□□ -0.02
ABCB1-201ENST00000265724 TRIM26Q12899 539 aaPredicted RBP14.88□□□□□ -0.03
ABCB1-201ENST00000265724 CCDC180Q9P1Z9 1646 aa14.84□□□□□ -0.03
ABCB1-201ENST00000265724 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
ABCB1-201ENST00000265724 HRCP23327 699 aa14.69□□□□□ -0.06
ABCB1-201ENST00000265724 ITGAEP38570 1179 aa14.65□□□□□ -0.06
ABCB1-201ENST00000265724 PELP1Q8IZL8 1130 aaKnown RBP14.62□□□□□ -0.07
ABCB1-201ENST00000265724 HNRNPUL2Q1KMD3 747 aaKnown RBP14.62□□□□□ -0.07
ABCB1-201ENST00000265724 CENPBP07199 599 aaPredicted RBP14.59□□□□□ -0.07
ABCB1-201ENST00000265724 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.56□□□□□ -0.08
ABCB1-201ENST00000265724 YTHDC1Q96MU7 727 aaKnown RBP14.46□□□□□ -0.1
ABCB1-201ENST00000265724 CSRNP3Q8WYN3 585 aa14.45□□□□□ -0.1
ABCB1-201ENST00000265724 RB1CC1Q8TDY2 1594 aa14.38□□□□□ -0.11
ABCB1-201ENST00000265724 RSF1Q96T23 1441 aaPredicted RBP14.35□□□□□ -0.11
ABCB1-201ENST00000265724 FAM50AQ14320 339 aaKnown RBP14.34□□□□□ -0.11
ABCB1-201ENST00000265724 NACADO15069 1562 aa14.33□□□□□ -0.12
ABCB1-201ENST00000265724 MYT1LQ9UL68 1186 aa14.31□□□□□ -0.12
ABCB1-201ENST00000265724 DCAF1Q9Y4B6 1507 aa14.27□□□□□ -0.12
ABCB1-201ENST00000265724 P3H3Q8IVL6 736 aa14.26□□□□□ -0.13
ABCB1-201ENST00000265724 FBLN2P98095 1184 aa14.25□□□□□ -0.13
ABCB1-201ENST00000265724 POLR3GLQ9BT43 218 aa14.21□□□□□ -0.13
ABCB1-201ENST00000265724 NEFLP07196 543 aa14.2□□□□□ -0.14
ABCB1-201ENST00000265724 DIEXFQ68CQ4 756 aaKnown RBP14.17□□□□□ -0.14
ABCB1-201ENST00000265724 MYO15BQ96JP2 1530 aa14.16□□□□□ -0.14
ABCB1-201ENST00000265724 TRIM52Q96A61 297 aa14.15□□□□□ -0.14
ABCB1-201ENST00000265724 CECR2Q9BXF3 1484 aa14.15□□□□□ -0.15
ABCB1-201ENST00000265724 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
ABCB1-201ENST00000265724 ARID3CA6NKF2 412 aa14.13□□□□□ -0.15
ABCB1-201ENST00000265724 CNGB1Q14028 1251 aaPredicted RBP14.12□□□□□ -0.15
ABCB1-201ENST00000265724 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
ABCB1-201ENST00000265724 BAZ1BQ9UIG0 1483 aaKnown RBP14.05□□□□□ -0.16
ABCB1-201ENST00000265724 WRNQ14191 1432 aaPredicted RBP eCLIP14□□□□□ -0.17
ABCB1-201ENST00000265724 ERICH6Q7L0X2 663 aa13.99□□□□□ -0.17
ABCB1-201ENST00000265724 ZNF316A6NFI3 1004 aaPredicted RBP13.96□□□□□ -0.17
ABCB1-201ENST00000265724 MROH2BQ7Z745 1585 aa13.96□□□□□ -0.17
ABCB1-201ENST00000265724 CLIP1P30622 1438 aa13.95□□□□□ -0.18
ABCB1-201ENST00000265724 EEA1Q15075 1411 aa13.95□□□□□ -0.18
ABCB1-201ENST00000265724 ZNF326Q5BKZ1 582 aaKnown RBP13.94□□□□□ -0.18
ABCB1-201ENST00000265724 ZNF777Q9ULD5 760 aaPredicted RBP13.94□□□□□ -0.18
ABCB1-201ENST00000265724 CDK11AQ9UQ88 783 aaPredicted RBP13.93□□□□□ -0.18
ABCB1-201ENST00000265724 CEP162Q5TB80 1403 aa13.9□□□□□ -0.18
ABCB1-201ENST00000265724 GOLGA3Q08378 1498 aa13.9□□□□□ -0.18
ABCB1-201ENST00000265724 SLC4A1APQ9BWU0 796 aaKnown RBP13.86□□□□□ -0.19
ABCB1-201ENST00000265724 TNIKQ9UKE5 1360 aa13.83□□□□□ -0.2
ABCB1-201ENST00000265724 KIF27Q86VH2 1401 aa13.83□□□□□ -0.2
ABCB1-201ENST00000265724 CCDC88BA6NC98 1476 aa13.82□□□□□ -0.2
ABCB1-201ENST00000265724 ANP32CO43423 234 aa13.82□□□□□ -0.2
ABCB1-201ENST00000265724 CHMP7Q8WUX9 453 aaPredicted RBP13.81□□□□□ -0.2
ABCB1-201ENST00000265724 CEP164Q9UPV0 1460 aa13.8□□□□□ -0.2
ABCB1-201ENST00000265724 CHIC2Q9UKJ5 165 aa13.79□□□□□ -0.2
ABCB1-201ENST00000265724 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
ABCB1-201ENST00000265724 SOGA1O94964 1423 aa13.79□□□□□ -0.2
ABCB1-201ENST00000265724 WIZO95785 1651 aa13.75□□□□□ -0.21
ABCB1-201ENST00000265724 ABCC8Q09428 1581 aa13.74□□□□□ -0.21
ABCB1-201ENST00000265724 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
ABCB1-201ENST00000265724 GTF3C3Q9Y5Q9 886 aa13.74□□□□□ -0.21
ABCB1-201ENST00000265724 SMARCA2P51531 1590 aa13.7□□□□□ -0.22
ABCB1-201ENST00000265724 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
ABCB1-201ENST00000265724 CUX2O14529 1486 aa13.66□□□□□ -0.22
ABCB1-201ENST00000265724 BCANQ96GW7 911 aa13.65□□□□□ -0.22
ABCB1-201ENST00000265724 NPM1P06748 294 aaKnown RBP eCLIP13.64□□□□□ -0.23
ABCB1-201ENST00000265724 TSPY4P0CV99 314 aa13.64□□□□□ -0.23
ABCB1-201ENST00000265724 TSPY10P0CW01 314 aa13.64□□□□□ -0.23
ABCB1-201ENST00000265724 DDX10Q13206 875 aaKnown RBP13.64□□□□□ -0.23
ABCB1-201ENST00000265724 CARMIL1Q5VZK9 1371 aa13.64□□□□□ -0.23
ABCB1-201ENST00000265724 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
ABCB1-201ENST00000265724 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
ABCB1-201ENST00000265724 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.61□□□□□ -0.23
ABCB1-201ENST00000265724 ATAD2BQ9ULI0 1458 aa13.6□□□□□ -0.23
ABCB1-201ENST00000265724 SMARCA4P51532 1647 aa13.59□□□□□ -0.23
ABCB1-201ENST00000265724 ERCC6Q03468 1493 aa13.59□□□□□ -0.23
ABCB1-201ENST00000265724 PLEKHD1A6NEE1 506 aa13.58□□□□□ -0.24
ABCB1-201ENST00000265724 DAXXQ9UER7 740 aaPredicted RBP13.56□□□□□ -0.24
ABCB1-201ENST00000265724 CHGAP10645 457 aaKnown RBP13.56□□□□□ -0.24
ABCB1-201ENST00000265724 KCNH8Q96L42 1107 aa13.55□□□□□ -0.24
ABCB1-201ENST00000265724 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
ABCB1-201ENST00000265724 VPS8Q8N3P4 1428 aa13.52□□□□□ -0.25
ABCB1-201ENST00000265724 KDM2AQ9Y2K7 1162 aa13.52□□□□□ -0.25
ABCB1-201ENST00000265724 CADPSQ9ULU8 1353 aa13.52□□□□□ -0.25
ABCB1-201ENST00000265724 CFDP1Q9UEE9 299 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms