RNA–Protein interactions for RNA: ENST00000434172.2

CKS1BP5-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 5, humanhuman

BASIC

Gene CKS1BP5, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP5-201ENST00000434172 CHIC1Q5VXU3 224 aa11.48□□□□□ -0.57
CKS1BP5-201ENST00000434172 AEBP2Q6ZN18 517 aaPredicted RBP10.93□□□□□ -0.66
CKS1BP5-201ENST00000434172 PHF23Q9BUL5 403 aaPredicted RBP10.1□□□□□ -0.79
CKS1BP5-201ENST00000434172 PLPPR3Q6T4P5 718 aa9.69□□□□□ -0.86
CKS1BP5-201ENST00000434172 EHMT2Q96KQ7 1210 aa9.48□□□□□ -0.89
CKS1BP5-201ENST00000434172 SENP3Q9H4L4 574 aaPredicted RBP9.26□□□□□ -0.93
CKS1BP5-201ENST00000434172 KCNA4P22459 653 aa9.2□□□□□ -0.94
CKS1BP5-201ENST00000434172 SLC24A1O60721 1099 aa9.18□□□□□ -0.94
CKS1BP5-201ENST00000434172 CSRNP3Q8WYN3 585 aa9.05□□□□□ -0.96
CKS1BP5-201ENST00000434172 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
CKS1BP5-201ENST00000434172 ADRA2BP18089 450 aa8.91□□□□□ -0.98
CKS1BP5-201ENST00000434172 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
CKS1BP5-201ENST00000434172 RTN4Q9NQC3 1192 aaKnown RBP8.73□□□□□ -1.01
CKS1BP5-201ENST00000434172 NCBP3Q53F19 620 aaKnown RBP8.65□□□□□ -1.02
CKS1BP5-201ENST00000434172 PPP6R1Q9UPN7 881 aa8.64□□□□□ -1.03
CKS1BP5-201ENST00000434172 PPP4R3CPQ6ZMV5 832 aa8.58□□□□□ -1.04
CKS1BP5-201ENST00000434172 ZBTB22O15209 634 aa8.47□□□□□ -1.05
CKS1BP5-201ENST00000434172 NPM3O75607 178 aaKnown RBP8.44□□□□□ -1.06
CKS1BP5-201ENST00000434172 FOXD1Q16676 465 aa8.42□□□□□ -1.06
CKS1BP5-201ENST00000434172 FOXD4L1Q9NU39 408 aa8.32□□□□□ -1.08
CKS1BP5-201ENST00000434172 DNAJC5BQ9UF47 199 aa8.23□□□□□ -1.09
CKS1BP5-201ENST00000434172 CNKSR2Q8WXI2 1034 aa8.22□□□□□ -1.09
CKS1BP5-201ENST00000434172 PIAS4Q8N2W9 510 aaPredicted RBP8.15□□□□□ -1.1
CKS1BP5-201ENST00000434172 FKBP8Q14318 412 aa8.14□□□□□ -1.11
CKS1BP5-201ENST00000434172 SCAF1Q9H7N4 1312 aaKnown RBP8.08□□□□□ -1.12
CKS1BP5-201ENST00000434172 BCANQ96GW7 911 aa8.06□□□□□ -1.12
CKS1BP5-201ENST00000434172 PLCB2Q00722 1185 aa8.05□□□□□ -1.12
CKS1BP5-201ENST00000434172 ATXN8OSP0DMR3 200 aa8.03□□□□□ -1.12
CKS1BP5-201ENST00000434172 TAOK2Q9UL54 1235 aa7.95□□□□□ -1.14
CKS1BP5-201ENST00000434172 PRKCSHP14314 528 aaPredicted RBP7.9□□□□□ -1.14
CKS1BP5-201ENST00000434172 HAP1P54257 671 aaPredicted RBP7.89□□□□□ -1.15
CKS1BP5-201ENST00000434172 RNF216Q9NWF9 866 aaPredicted RBP7.88□□□□□ -1.15
CKS1BP5-201ENST00000434172 VSIG10Q8N0Z9 540 aa7.87□□□□□ -1.15
CKS1BP5-201ENST00000434172 MYCNP04198 464 aaPredicted RBP7.85□□□□□ -1.15
CKS1BP5-201ENST00000434172 DAXXQ9UER7 740 aaPredicted RBP7.85□□□□□ -1.15
CKS1BP5-201ENST00000434172 TPRNQ4KMQ1 711 aa7.78□□□□□ -1.16
CKS1BP5-201ENST00000434172 SLC4A2P04920 1241 aa7.77□□□□□ -1.17
CKS1BP5-201ENST00000434172 ARXQ96QS3 562 aa7.76□□□□□ -1.17
CKS1BP5-201ENST00000434172 FBXO3Q9UK99 471 aa7.75□□□□□ -1.17
CKS1BP5-201ENST00000434172 ERICH6Q7L0X2 663 aa7.73□□□□□ -1.17
CKS1BP5-201ENST00000434172 DCAF8L2P0C7V8 631 aa7.67□□□□□ -1.18
CKS1BP5-201ENST00000434172 TIMELESSQ9UNS1 1208 aa7.65□□□□□ -1.18
CKS1BP5-201ENST00000434172 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
CKS1BP5-201ENST00000434172 MAPK8IP2Q13387 824 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP5-201ENST00000434172 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
CKS1BP5-201ENST00000434172 TULP1O00294 542 aaPredicted RBP7.6□□□□□ -1.19
CKS1BP5-201ENST00000434172 KDM2AQ9Y2K7 1162 aa7.6□□□□□ -1.19
CKS1BP5-201ENST00000434172 VASPP50552 380 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP5-201ENST00000434172 BBXQ8WY36 941 aaPredicted RBP7.57□□□□□ -1.2
CKS1BP5-201ENST00000434172 MSH5O43196 834 aa7.56□□□□□ -1.2
CKS1BP5-201ENST00000434172 GTF3C3Q9Y5Q9 886 aa7.54□□□□□ -1.2
CKS1BP5-201ENST00000434172 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
CKS1BP5-201ENST00000434172 PKD2Q13563 968 aa7.52□□□□□ -1.21
CKS1BP5-201ENST00000434172 FBLN2P98095 1184 aa7.51□□□□□ -1.21
CKS1BP5-201ENST00000434172 DMRT2Q9Y5R5 561 aa7.5□□□□□ -1.21
CKS1BP5-201ENST00000434172 PROM2Q8N271 834 aa7.49□□□□□ -1.21
CKS1BP5-201ENST00000434172 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.48□□□□□ -1.21
CKS1BP5-201ENST00000434172 HNRNPUL2Q1KMD3 747 aaKnown RBP7.48□□□□□ -1.21
CKS1BP5-201ENST00000434172 PAXIP1Q6ZW49 1069 aaPredicted RBP7.48□□□□□ -1.21
CKS1BP5-201ENST00000434172 NBR1Q14596 966 aa7.47□□□□□ -1.21
CKS1BP5-201ENST00000434172 SAMD1Q6SPF0 538 aaPredicted RBP7.47□□□□□ -1.21
CKS1BP5-201ENST00000434172 IFNLR1Q8IU57 520 aaPredicted RBP7.47□□□□□ -1.21
CKS1BP5-201ENST00000434172 ATF5Q9Y2D1 282 aaPredicted RBP7.46□□□□□ -1.22
CKS1BP5-201ENST00000434172 SPDYE4A6NLX3 237 aa7.45□□□□□ -1.22
CKS1BP5-201ENST00000434172 CFAP44Q96MT7 982 aa7.44□□□□□ -1.22
CKS1BP5-201ENST00000434172 TMEM132AQ24JP5 1023 aa7.41□□□□□ -1.22
CKS1BP5-201ENST00000434172 SPRYD3Q8NCJ5 442 aa7.41□□□□□ -1.22
CKS1BP5-201ENST00000434172 DNAJC5Q9H3Z4 198 aa7.4□□□□□ -1.22
CKS1BP5-201ENST00000434172 NPM1P06748 294 aaKnown RBP eCLIP7.37□□□□□ -1.23
CKS1BP5-201ENST00000434172 TSHZ2Q9NRE2 1034 aa7.37□□□□□ -1.23
CKS1BP5-201ENST00000434172 ECM2O94769 699 aaPredicted RBP7.35□□□□□ -1.23
CKS1BP5-201ENST00000434172 C14orf37Q86TY3 774 aa7.35□□□□□ -1.23
CKS1BP5-201ENST00000434172 ZNF219Q9P2Y4 722 aaPredicted RBP7.33□□□□□ -1.24
CKS1BP5-201ENST00000434172 RANGAP1P46060 587 aaPredicted RBP7.31□□□□□ -1.24
CKS1BP5-201ENST00000434172 SPOCK2Q92563 424 aa7.31□□□□□ -1.24
CKS1BP5-201ENST00000434172 APLP2Q06481 763 aa7.25□□□□□ -1.25
CKS1BP5-201ENST00000434172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.25□□□□□ -1.25
CKS1BP5-201ENST00000434172 RGL2O15211 777 aa7.23□□□□□ -1.25
CKS1BP5-201ENST00000434172 KLHL34Q8N239 644 aa7.23□□□□□ -1.25
CKS1BP5-201ENST00000434172 MKRN4PQ13434 485 aaPredicted RBP7.21□□□□□ -1.26
CKS1BP5-201ENST00000434172 U3KPZ7 1027 aaPredicted RBP7.21□□□□□ -1.26
CKS1BP5-201ENST00000434172 CHGAP10645 457 aaKnown RBP7.19□□□□□ -1.26
CKS1BP5-201ENST00000434172 PODXL2Q9NZ53 605 aa7.17□□□□□ -1.26
CKS1BP5-201ENST00000434172 HS6ST3Q8IZP7 471 aa7.15□□□□□ -1.26
CKS1BP5-201ENST00000434172 TRIM41Q8WV44 630 aa7.13□□□□□ -1.27
CKS1BP5-201ENST00000434172 STAG3Q9UJ98 1225 aa7.12□□□□□ -1.27
CKS1BP5-201ENST00000434172 P3H3Q8IVL6 736 aa7.07□□□□□ -1.28
CKS1BP5-201ENST00000434172 PLCD3Q8N3E9 789 aa7.06□□□□□ -1.28
CKS1BP5-201ENST00000434172 DCAF8L1A6NGE4 600 aa7.05□□□□□ -1.28
CKS1BP5-201ENST00000434172 SUPT5HO00267 1087 aaKnown RBP7.04□□□□□ -1.28
CKS1BP5-201ENST00000434172 BRPF1P55201 1214 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP5-201ENST00000434172 ZBTB47Q9UFB7 747 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP5-201ENST00000434172 CIZ1Q9ULV3 898 aaPredicted RBP7.02□□□□□ -1.29
CKS1BP5-201ENST00000434172 GTPBP6O43824 516 aaPredicted RBP6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 LMOD2Q6P5Q4 547 aa6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 RYDENQ9NUL5 291 aaKnown RBP6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 ZBTB12Q9Y330 459 aaPredicted RBP6.99□□□□□ -1.29
CKS1BP5-201ENST00000434172 NPM2Q86SE8 214 aaKnown RBP6.98□□□□□ -1.29
CKS1BP5-201ENST00000434172 PLEKHG5O94827 1062 aa6.96□□□□□ -1.3
CKS1BP5-201ENST00000434172 NKX1-1Q15270 411 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms