Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 SLC28A2-201ENST00000347644 4374 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 VWA5A-202ENST00000392744 2691 ntAPPRIS ALT2 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 BICC1-202ENST00000373886 5475 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 TRIM16-201ENST00000336708 2900 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 BTD-206ENST00000437172 2097 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 GGCX-201ENST00000233838 7569 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 FLI1-202ENST00000344954 3427 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 EIF1AD-201ENST00000312234 2887 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 DNAJB13-205ENST00000543947 1779 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 ADGRE2-212ENST00000601345 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 OXNAD1-201ENST00000285083 3929 ntAPPRIS P2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 AC008543.1-201ENST00000344893 3383 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 AL035696.1-201ENST00000381078 2007 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 COPB1-202ENST00000439561 3382 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 PPP1R3B-201ENST00000310455 5548 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 CD274-202ENST00000381577 3644 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 HLTF-208ENST00000494055 3633 ntAPPRIS P3 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 ANKRD55-201ENST00000341048 2502 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 CTNNB1-204ENST00000405570 2513 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC02181-201ENST00000430050 4083 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 AC131392.2-201ENST00000505635 4332 ntBASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 TMOD1-203ENST00000395211 3259 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 WDR44-203ENST00000371825 4029 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 C1S-201ENST00000328916 2972 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 N4BP2L1-204ENST00000380139 2994 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
KRTAP4-4Q9BYR3 HIP1-201ENST00000336926 8013 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 TNPO1P2-201ENST00000426249 2665 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 THBS3-211ENST00000541990 2928 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NACA-216ENST00000550952 2922 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SLC19A3-201ENST00000258403 3105 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SERINC4-202ENST00000319327 2630 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NFIB-206ENST00000397575 2869 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 PFKFB1-204ENST00000614686 1353 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 TRIM2-203ENST00000437508 3832 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ZSCAN31-203ENST00000414429 3551 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 KCNE1-201ENST00000337385 3347 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LRRC8D-202ENST00000394593 3345 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 BAGE2-203ENST00000496773 2598 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 POLR2D-201ENST00000272645 5042 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 FAM205BP-202ENST00000399773 4009 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC087762.2-201ENST00000639346 3773 ntBASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LINC01630-201ENST00000435144 5489 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 TPP1-201ENST00000299427 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ADGRE3-202ENST00000344373 2267 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 SCMH1-210ENST00000402904 3204 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 CELF2-215ENST00000636488 3908 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 MR1-205ENST00000434571 7479 ntTSL 5 BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 ATP5E-201ENST00000243997 3665 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KRTAP4-4Q9BYR3 PCDH15-224ENST00000612394 5765 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 134.5 ms