RNA–Protein interactions for RNA: ENST00000336926.10

HIP1-201, Transcript of huntingtin interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIP1, Length 8,013 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1-201ENST00000336926 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
HIP1-201ENST00000336926 NISCHQ9Y2I1 1504 aa15.01□□□□□ -0.01
HIP1-201ENST00000336926 SUPT5HO00267 1087 aaKnown RBP14.45□□□□□ -0.1
HIP1-201ENST00000336926 SHROOM4Q9ULL8 1493 aa14.21□□□□□ -0.13
HIP1-201ENST00000336926 PELP1Q8IZL8 1130 aaKnown RBP14.18□□□□□ -0.14
HIP1-201ENST00000336926 APLP2Q06481 763 aa14.07□□□□□ -0.16
HIP1-201ENST00000336926 FAM9AQ8IZU1 332 aaPredicted RBP14.06□□□□□ -0.16
HIP1-201ENST00000336926 EHMT2Q96KQ7 1210 aa13.83□□□□□ -0.2
HIP1-201ENST00000336926 ZEB1P37275 1124 aaPredicted RBP13.67□□□□□ -0.22
HIP1-201ENST00000336926 TRIM41Q8WV44 630 aa13.56□□□□□ -0.24
HIP1-201ENST00000336926 CCER1Q8TC90 406 aaPredicted RBP13.55□□□□□ -0.24
HIP1-201ENST00000336926 CENPBP07199 599 aaPredicted RBP13.53□□□□□ -0.24
HIP1-201ENST00000336926 PCGF6Q9BYE7 350 aa13.5□□□□□ -0.25
HIP1-201ENST00000336926 UBTFP17480 764 aaKnown RBP13.41□□□□□ -0.26
HIP1-201ENST00000336926 TTBK1Q5TCY1 1321 aaPredicted RBP13.41□□□□□ -0.26
HIP1-201ENST00000336926 ERICH6Q7L0X2 663 aa13.41□□□□□ -0.26
HIP1-201ENST00000336926 ATP1B4Q9UN42 357 aaPredicted RBP13.4□□□□□ -0.26
HIP1-201ENST00000336926 RANGAP1P46060 587 aaPredicted RBP13.34□□□□□ -0.27
HIP1-201ENST00000336926 NEFLP07196 543 aa13.29□□□□□ -0.28
HIP1-201ENST00000336926 ABCC9O60706 1549 aa13.21□□□□□ -0.29
HIP1-201ENST00000336926 MYT1Q01538 1121 aa13.17□□□□□ -0.3
HIP1-201ENST00000336926 TRIM26Q12899 539 aaPredicted RBP13.14□□□□□ -0.31
HIP1-201ENST00000336926 MYT1LQ9UL68 1186 aa13.12□□□□□ -0.31
HIP1-201ENST00000336926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.03□□□□□ -0.32
HIP1-201ENST00000336926 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
HIP1-201ENST00000336926 PABPN1Q86U42 306 aaKnown RBP eCLIP12.98□□□□□ -0.33
HIP1-201ENST00000336926 DAXXQ9UER7 740 aaPredicted RBP12.95□□□□□ -0.34
HIP1-201ENST00000336926 YTHDC1Q96MU7 727 aaKnown RBP12.94□□□□□ -0.34
HIP1-201ENST00000336926 PPARGC1BQ86YN6 1023 aaKnown RBP12.87□□□□□ -0.35
HIP1-201ENST00000336926 ITGAEP38570 1179 aa12.85□□□□□ -0.35
HIP1-201ENST00000336926 HRCP23327 699 aa12.81□□□□□ -0.36
HIP1-201ENST00000336926 CHIC1Q5VXU3 224 aa12.8□□□□□ -0.36
HIP1-201ENST00000336926 POLR3GLQ9BT43 218 aa12.8□□□□□ -0.36
HIP1-201ENST00000336926 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
HIP1-201ENST00000336926 FBLN2P98095 1184 aa12.72□□□□□ -0.37
HIP1-201ENST00000336926 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
HIP1-201ENST00000336926 SLC4A1APQ9BWU0 796 aaKnown RBP12.67□□□□□ -0.38
HIP1-201ENST00000336926 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
HIP1-201ENST00000336926 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
HIP1-201ENST00000336926 ZNF316A6NFI3 1004 aaPredicted RBP12.61□□□□□ -0.39
HIP1-201ENST00000336926 TRIM52Q96A61 297 aa12.58□□□□□ -0.4
HIP1-201ENST00000336926 CLSPNQ9HAW4 1339 aa12.58□□□□□ -0.4
HIP1-201ENST00000336926 SCRIBQ14160 1630 aa12.57□□□□□ -0.4
HIP1-201ENST00000336926 RTL5Q5HYW3 569 aaPredicted RBP12.55□□□□□ -0.4
HIP1-201ENST00000336926 RB1CC1Q8TDY2 1594 aa12.52□□□□□ -0.4
HIP1-201ENST00000336926 ANP32CO43423 234 aa12.51□□□□□ -0.41
HIP1-201ENST00000336926 CNGB1Q14028 1251 aaPredicted RBP12.51□□□□□ -0.41
HIP1-201ENST00000336926 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
HIP1-201ENST00000336926 NEUROD1Q13562 356 aa12.46□□□□□ -0.41
HIP1-201ENST00000336926 NPM1P06748 294 aaKnown RBP eCLIP12.46□□□□□ -0.42
HIP1-201ENST00000336926 ESF1Q9H501 851 aaKnown RBP12.44□□□□□ -0.42
HIP1-201ENST00000336926 NEFMP07197 916 aa12.43□□□□□ -0.42
HIP1-201ENST00000336926 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
HIP1-201ENST00000336926 BCANQ96GW7 911 aa12.41□□□□□ -0.42
HIP1-201ENST00000336926 ZCCHC6Q5VYS8 1495 aaKnown RBP12.41□□□□□ -0.42
HIP1-201ENST00000336926 ZNF326Q5BKZ1 582 aaKnown RBP12.34□□□□□ -0.43
HIP1-201ENST00000336926 CSRNP3Q8WYN3 585 aa12.34□□□□□ -0.43
HIP1-201ENST00000336926 CANXP27824 592 aaKnown RBP12.33□□□□□ -0.44
HIP1-201ENST00000336926 NACADO15069 1562 aa12.3□□□□□ -0.44
HIP1-201ENST00000336926 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
HIP1-201ENST00000336926 SLC24A1O60721 1099 aa12.23□□□□□ -0.45
HIP1-201ENST00000336926 TONSLQ96HA7 1378 aa12.23□□□□□ -0.45
HIP1-201ENST00000336926 PLPPR3Q6T4P5 718 aa12.22□□□□□ -0.45
HIP1-201ENST00000336926 STAG3Q9UJ98 1225 aa12.22□□□□□ -0.45
HIP1-201ENST00000336926 ERCC6Q03468 1493 aa12.22□□□□□ -0.45
HIP1-201ENST00000336926 ARID3CA6NKF2 412 aa12.22□□□□□ -0.45
HIP1-201ENST00000336926 P3H3Q8IVL6 736 aa12.22□□□□□ -0.45
HIP1-201ENST00000336926 CHMP7Q8WUX9 453 aaPredicted RBP12.22□□□□□ -0.45
HIP1-201ENST00000336926 ANP32AP39687 249 aaKnown RBP12.21□□□□□ -0.45
HIP1-201ENST00000336926 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
HIP1-201ENST00000336926 GTF3C3Q9Y5Q9 886 aa12.21□□□□□ -0.46
HIP1-201ENST00000336926 ZNF777Q9ULD5 760 aaPredicted RBP12.19□□□□□ -0.46
HIP1-201ENST00000336926 EEA1Q15075 1411 aa12.12□□□□□ -0.47
HIP1-201ENST00000336926 UPF2Q9HAU5 1272 aaKnown RBP12.12□□□□□ -0.47
HIP1-201ENST00000336926 ANP32BQ92688 251 aaKnown RBP12.11□□□□□ -0.47
HIP1-201ENST00000336926 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.07□□□□□ -0.48
HIP1-201ENST00000336926 RSF1Q96T23 1441 aaPredicted RBP12.07□□□□□ -0.48
HIP1-201ENST00000336926 MTUS2Q5JR59 1369 aa12.07□□□□□ -0.48
HIP1-201ENST00000336926 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
HIP1-201ENST00000336926 CHGAP10645 457 aaKnown RBP12.06□□□□□ -0.48
HIP1-201ENST00000336926 HSP90AA1P07900 732 aaKnown RBP12.05□□□□□ -0.48
HIP1-201ENST00000336926 TSPY4P0CV99 314 aa12.05□□□□□ -0.48
HIP1-201ENST00000336926 TSPY10P0CW01 314 aa12.05□□□□□ -0.48
HIP1-201ENST00000336926 GOLGA3Q08378 1498 aa12.04□□□□□ -0.48
HIP1-201ENST00000336926 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
HIP1-201ENST00000336926 CLIP1P30622 1438 aa12.01□□□□□ -0.49
HIP1-201ENST00000336926 BCL11AQ9H165 835 aa12□□□□□ -0.49
HIP1-201ENST00000336926 WDR43Q15061 677 aaKnown RBP eCLIP12□□□□□ -0.49
HIP1-201ENST00000336926 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
HIP1-201ENST00000336926 BAZ1AQ9NRL2 1556 aaPredicted RBP11.98□□□□□ -0.49
HIP1-201ENST00000336926 ARID4BQ4LE39 1312 aaPredicted RBP11.97□□□□□ -0.49
HIP1-201ENST00000336926 TRHP20396 242 aaPredicted RBP11.97□□□□□ -0.49
HIP1-201ENST00000336926 FKBP8Q14318 412 aa11.95□□□□□ -0.5
HIP1-201ENST00000336926 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.94□□□□□ -0.5
HIP1-201ENST00000336926 DDX10Q13206 875 aaKnown RBP11.94□□□□□ -0.5
HIP1-201ENST00000336926 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
HIP1-201ENST00000336926 FAM9BQ8IZU0 186 aa11.94□□□□□ -0.5
HIP1-201ENST00000336926 KIF27Q86VH2 1401 aa11.93□□□□□ -0.5
HIP1-201ENST00000336926 CEP164Q9UPV0 1460 aa11.93□□□□□ -0.5
HIP1-201ENST00000336926 MYH16Q9H6N6 1097 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms