RNA–Protein interactions for RNA: ENST00000340433.3

RTL4-201, Transcript of retrotransposon Gag like 4, humanhuman

APPRIS P1 BASIC

Gene RTL4, Length 2,613 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4-201ENST00000340433 AEBP2Q6ZN18 517 aaPredicted RBP9.84□□□□□ -0.83
RTL4-201ENST00000340433 CHIC1Q5VXU3 224 aa9.41□□□□□ -0.9
RTL4-201ENST00000340433 SENP3Q9H4L4 574 aaPredicted RBP8.68□□□□□ -1.02
RTL4-201ENST00000340433 POTEDQ86YR6 584 aa8.53□□□□□ -1.04
RTL4-201ENST00000340433 PHF23Q9BUL5 403 aaPredicted RBP8.38□□□□□ -1.07
RTL4-201ENST00000340433 FOXD1Q16676 465 aa8.02□□□□□ -1.12
RTL4-201ENST00000340433 MSH5O43196 834 aa7.91□□□□□ -1.14
RTL4-201ENST00000340433 PIAS4Q8N2W9 510 aaPredicted RBP7.39□□□□□ -1.23
RTL4-201ENST00000340433 PLPPR3Q6T4P5 718 aa7.11□□□□□ -1.27
RTL4-201ENST00000340433 CACNB1Q02641 598 aaPredicted RBP7.04□□□□□ -1.28
RTL4-201ENST00000340433 PPP6R1Q9UPN7 881 aa6.97□□□□□ -1.29
RTL4-201ENST00000340433 ADRA2BP18089 450 aa6.94□□□□□ -1.3
RTL4-201ENST00000340433 DMRT2Q9Y5R5 561 aa6.77□□□□□ -1.33
RTL4-201ENST00000340433 SCAF1Q9H7N4 1312 aaKnown RBP6.61□□□□□ -1.35
RTL4-201ENST00000340433 POTEHQ6S545 545 aa6.6□□□□□ -1.35
RTL4-201ENST00000340433 RNF39Q9H2S5 420 aa6.59□□□□□ -1.35
RTL4-201ENST00000340433 C1QBPQ07021 282 aaKnown RBP6.55□□□□□ -1.36
RTL4-201ENST00000340433 MAPK8IP2Q13387 824 aaPredicted RBP6.51□□□□□ -1.37
RTL4-201ENST00000340433 DCAF8L1A6NGE4 600 aa6.43□□□□□ -1.38
RTL4-201ENST00000340433 DNAJC5BQ9UF47 199 aa6.36□□□□□ -1.39
RTL4-201ENST00000340433 HOXD11P31277 338 aaPredicted RBP6.3□□□□□ -1.4
RTL4-201ENST00000340433 PPP4R3CPQ6ZMV5 832 aa6.29□□□□□ -1.4
RTL4-201ENST00000340433 KCNA4P22459 653 aa6.27□□□□□ -1.41
RTL4-201ENST00000340433 NCBP3Q53F19 620 aaKnown RBP6.13□□□□□ -1.43
RTL4-201ENST00000340433 RNF216Q9NWF9 866 aaPredicted RBP6.12□□□□□ -1.43
RTL4-201ENST00000340433 CNKSR2Q8WXI2 1034 aa6.08□□□□□ -1.44
RTL4-201ENST00000340433 NPM3O75607 178 aaKnown RBP6.06□□□□□ -1.44
RTL4-201ENST00000340433 NISCHQ9Y2I1 1504 aa6.05□□□□□ -1.44
RTL4-201ENST00000340433 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.98□□□□□ -1.45
RTL4-201ENST00000340433 SLC4A1APQ9BWU0 796 aaKnown RBP5.97□□□□□ -1.45
RTL4-201ENST00000340433 DSG3P32926 999 aa5.95□□□□□ -1.46
RTL4-201ENST00000340433 EHMT2Q96KQ7 1210 aa5.95□□□□□ -1.46
RTL4-201ENST00000340433 SP7Q8TDD2 431 aaPredicted RBP5.95□□□□□ -1.46
RTL4-201ENST00000340433 CAPN15O75808 1086 aa5.86□□□□□ -1.47
RTL4-201ENST00000340433 RBM42Q9BTD8 480 aaKnown RBP5.85□□□□□ -1.47
RTL4-201ENST00000340433 CHRDL2Q6WN34 429 aa5.81□□□□□ -1.48
RTL4-201ENST00000340433 CSRNP3Q8WYN3 585 aa5.81□□□□□ -1.48
RTL4-201ENST00000340433 APLP2Q06481 763 aa5.79□□□□□ -1.48
RTL4-201ENST00000340433 ZBTB22O15209 634 aa5.78□□□□□ -1.48
RTL4-201ENST00000340433 SPINK5Q9NQ38 1064 aaPredicted RBP5.75□□□□□ -1.49
RTL4-201ENST00000340433 U3KPZ7 1027 aaPredicted RBP5.73□□□□□ -1.49
RTL4-201ENST00000340433 FOXD4L1Q9NU39 408 aa5.72□□□□□ -1.49
RTL4-201ENST00000340433 SLC4A2P04920 1241 aa5.7□□□□□ -1.5
RTL4-201ENST00000340433 ZNF219Q9P2Y4 722 aaPredicted RBP5.7□□□□□ -1.5
RTL4-201ENST00000340433 CCDC180Q9P1Z9 1646 aa5.69□□□□□ -1.5
RTL4-201ENST00000340433 PLSCR2Q9NRY7 297 aa5.62□□□□□ -1.51
RTL4-201ENST00000340433 HAX1O00165 279 aa5.6□□□□□ -1.51
RTL4-201ENST00000340433 ABCB7O75027 752 aa5.6□□□□□ -1.51
RTL4-201ENST00000340433 TRHP20396 242 aaPredicted RBP5.6□□□□□ -1.51
RTL4-201ENST00000340433 MYCNP04198 464 aaPredicted RBP5.59□□□□□ -1.51
RTL4-201ENST00000340433 ABCC9O60706 1549 aa5.57□□□□□ -1.52
RTL4-201ENST00000340433 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.57□□□□□ -1.52
RTL4-201ENST00000340433 HNRNPUL2Q1KMD3 747 aaKnown RBP5.57□□□□□ -1.52
RTL4-201ENST00000340433 LHX8Q68G74 356 aa5.56□□□□□ -1.52
RTL4-201ENST00000340433 AKT1S1Q96B36 256 aa5.56□□□□□ -1.52
RTL4-201ENST00000340433 PIP4P2Q8N4L2 257 aa5.54□□□□□ -1.52
RTL4-201ENST00000340433 ATXN8OSP0DMR3 200 aa5.49□□□□□ -1.53
RTL4-201ENST00000340433 FXR2P51116 673 aaKnown RBP eCLIP5.46□□□□□ -1.53
RTL4-201ENST00000340433 SAMD1Q6SPF0 538 aaPredicted RBP5.46□□□□□ -1.53
RTL4-201ENST00000340433 ATF5Q9Y2D1 282 aaPredicted RBP5.46□□□□□ -1.53
RTL4-201ENST00000340433 REM2Q8IYK8 340 aaPredicted RBP5.42□□□□□ -1.54
RTL4-201ENST00000340433 RB1CC1Q8TDY2 1594 aa5.41□□□□□ -1.54
RTL4-201ENST00000340433 PCDH10Q9P2E7 1040 aa5.4□□□□□ -1.55
RTL4-201ENST00000340433 ZBTB12Q9Y330 459 aaPredicted RBP5.38□□□□□ -1.55
RTL4-201ENST00000340433 NACADO15069 1562 aa5.38□□□□□ -1.55
RTL4-201ENST00000340433 SHROOM4Q9ULL8 1493 aa5.37□□□□□ -1.55
RTL4-201ENST00000340433 MYO15BQ96JP2 1530 aa5.36□□□□□ -1.55
RTL4-201ENST00000340433 EVX2Q03828 476 aa5.35□□□□□ -1.55
RTL4-201ENST00000340433 PITPNM1O00562 1244 aa5.33□□□□□ -1.56
RTL4-201ENST00000340433 GABBR2O75899 941 aa5.33□□□□□ -1.56
RTL4-201ENST00000340433 C19orf67A6NJJ6 358 aa5.32□□□□□ -1.56
RTL4-201ENST00000340433 POLA2Q14181 598 aa5.32□□□□□ -1.56
RTL4-201ENST00000340433 UNC13AQ9UPW8 1703 aa5.31□□□□□ -1.56
RTL4-201ENST00000340433 CLCN6P51797 869 aa5.31□□□□□ -1.56
RTL4-201ENST00000340433 BICRAQ9NZM4 1560 aa5.28□□□□□ -1.56
RTL4-201ENST00000340433 DNAJC5Q9H3Z4 198 aa5.27□□□□□ -1.57
RTL4-201ENST00000340433 FKBP8Q14318 412 aa5.26□□□□□ -1.57
RTL4-201ENST00000340433 POTEMA6NI47 508 aa5.23□□□□□ -1.57
RTL4-201ENST00000340433 MKRN4PQ13434 485 aaPredicted RBP5.22□□□□□ -1.57
RTL4-201ENST00000340433 PRKAR2AP13861 404 aaKnown RBP5.21□□□□□ -1.58
RTL4-201ENST00000340433 POTEGQ6S5H5 508 aa5.2□□□□□ -1.58
RTL4-201ENST00000340433 FBLN2P98095 1184 aa5.19□□□□□ -1.58
RTL4-201ENST00000340433 DCAF1Q9Y4B6 1507 aa5.17□□□□□ -1.58
RTL4-201ENST00000340433 CC2D2AQ9P2K1 1620 aa5.16□□□□□ -1.58
RTL4-201ENST00000340433 SLC24A1O60721 1099 aa5.15□□□□□ -1.59
RTL4-201ENST00000340433 SPDYE4A6NLX3 237 aa5.14□□□□□ -1.59
RTL4-201ENST00000340433 POTEIP0CG38 1075 aa5.14□□□□□ -1.59
RTL4-201ENST00000340433 OSCARQ8IYS5 282 aa5.14□□□□□ -1.59
RTL4-201ENST00000340433 SPDYE1Q8NFV5 336 aaPredicted RBP5.14□□□□□ -1.59
RTL4-201ENST00000340433 CECR2Q9BXF3 1484 aa5.13□□□□□ -1.59
RTL4-201ENST00000340433 CUX2O14529 1486 aa5.13□□□□□ -1.59
RTL4-201ENST00000340433 DCAF8L2P0C7V8 631 aa5.12□□□□□ -1.59
RTL4-201ENST00000340433 DCBLD2Q96PD2 775 aa5.12□□□□□ -1.59
RTL4-201ENST00000340433 EIF4G1Q04637 1599 aaKnown RBP5.12□□□□□ -1.59
RTL4-201ENST00000340433 OTUD5Q96G74 571 aa5.09□□□□□ -1.6
RTL4-201ENST00000340433 SPDYE2BA6NHP3 402 aa5.08□□□□□ -1.6
RTL4-201ENST00000340433 SPDYE6P0CI01 402 aa5.08□□□□□ -1.6
RTL4-201ENST00000340433 SPDYE2Q495Y8 402 aa5.08□□□□□ -1.6
RTL4-201ENST00000340433 ZNF692Q9BU19 519 aaPredicted RBP5.05□□□□□ -1.6
RTL4-201ENST00000340433 PROM2Q8N271 834 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms