RNA–Protein interactions for RNA: ENST00000366497.6

NLRP3-204, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-204ENST00000366497 NISCHQ9Y2I1 1504 aa16.81■□□□□ 0.28
NLRP3-204ENST00000366497 DCAF8L2P0C7V8 631 aa15.9■□□□□ 0.14
NLRP3-204ENST00000366497 SHROOM4Q9ULL8 1493 aa15.33■□□□□ 0.04
NLRP3-204ENST00000366497 SUPT5HO00267 1087 aaKnown RBP15.29■□□□□ 0.04
NLRP3-204ENST00000366497 EHMT2Q96KQ7 1210 aa14.45□□□□□ -0.1
NLRP3-204ENST00000366497 FAM9AQ8IZU1 332 aaPredicted RBP14.3□□□□□ -0.12
NLRP3-204ENST00000366497 TRIM41Q8WV44 630 aa14.19□□□□□ -0.14
NLRP3-204ENST00000366497 PCGF6Q9BYE7 350 aa14.1□□□□□ -0.15
NLRP3-204ENST00000366497 ABCC9O60706 1549 aa14.09□□□□□ -0.15
NLRP3-204ENST00000366497 CHIC1Q5VXU3 224 aa14.08□□□□□ -0.16
NLRP3-204ENST00000366497 ZCCHC6Q5VYS8 1495 aaKnown RBP14.02□□□□□ -0.17
NLRP3-204ENST00000366497 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
NLRP3-204ENST00000366497 TTBK1Q5TCY1 1321 aaPredicted RBP13.91□□□□□ -0.18
NLRP3-204ENST00000366497 LOC105371045A0A1W2PR82 267 aa13.9□□□□□ -0.18
NLRP3-204ENST00000366497 APLP2Q06481 763 aa13.89□□□□□ -0.19
NLRP3-204ENST00000366497 RANGAP1P46060 587 aaPredicted RBP13.83□□□□□ -0.2
NLRP3-204ENST00000366497 UBTFP17480 764 aaKnown RBP13.82□□□□□ -0.2
NLRP3-204ENST00000366497 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
NLRP3-204ENST00000366497 PPARGC1BQ86YN6 1023 aaKnown RBP13.72□□□□□ -0.21
NLRP3-204ENST00000366497 SCRIBQ14160 1630 aa13.67□□□□□ -0.22
NLRP3-204ENST00000366497 TRIM26Q12899 539 aaPredicted RBP13.66□□□□□ -0.22
NLRP3-204ENST00000366497 CCER1Q8TC90 406 aaPredicted RBP13.61□□□□□ -0.23
NLRP3-204ENST00000366497 ZEB1P37275 1124 aaPredicted RBP13.6□□□□□ -0.23
NLRP3-204ENST00000366497 HRCP23327 699 aa13.55□□□□□ -0.24
NLRP3-204ENST00000366497 ATP1B4Q9UN42 357 aaPredicted RBP13.54□□□□□ -0.24
NLRP3-204ENST00000366497 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
NLRP3-204ENST00000366497 RSF1Q96T23 1441 aaPredicted RBP13.4□□□□□ -0.26
NLRP3-204ENST00000366497 NACADO15069 1562 aa13.36□□□□□ -0.27
NLRP3-204ENST00000366497 RB1CC1Q8TDY2 1594 aa13.34□□□□□ -0.27
NLRP3-204ENST00000366497 HNRNPUL2Q1KMD3 747 aaKnown RBP13.31□□□□□ -0.28
NLRP3-204ENST00000366497 CSRNP3Q8WYN3 585 aa13.29□□□□□ -0.28
NLRP3-204ENST00000366497 MYO15BQ96JP2 1530 aa13.28□□□□□ -0.28
NLRP3-204ENST00000366497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.26□□□□□ -0.29
NLRP3-204ENST00000366497 ITGAEP38570 1179 aa13.26□□□□□ -0.29
NLRP3-204ENST00000366497 CECR2Q9BXF3 1484 aa13.22□□□□□ -0.29
NLRP3-204ENST00000366497 PELP1Q8IZL8 1130 aaKnown RBP13.22□□□□□ -0.29
NLRP3-204ENST00000366497 CENPBP07199 599 aaPredicted RBP13.17□□□□□ -0.3
NLRP3-204ENST00000366497 BAZ1AQ9NRL2 1556 aaPredicted RBP13.08□□□□□ -0.32
NLRP3-204ENST00000366497 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.32
NLRP3-204ENST00000366497 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
NLRP3-204ENST00000366497 MYT1Q01538 1121 aa13.04□□□□□ -0.32
NLRP3-204ENST00000366497 FAM50AQ14320 339 aaKnown RBP13.01□□□□□ -0.33
NLRP3-204ENST00000366497 P3H3Q8IVL6 736 aa13□□□□□ -0.33
NLRP3-204ENST00000366497 BAZ1BQ9UIG0 1483 aaKnown RBP12.98□□□□□ -0.33
NLRP3-204ENST00000366497 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
NLRP3-204ENST00000366497 DIEXFQ68CQ4 756 aaKnown RBP12.95□□□□□ -0.34
NLRP3-204ENST00000366497 EEA1Q15075 1411 aa12.9□□□□□ -0.34
NLRP3-204ENST00000366497 CCDC88BA6NC98 1476 aa12.89□□□□□ -0.35
NLRP3-204ENST00000366497 FBLN2P98095 1184 aa12.88□□□□□ -0.35
NLRP3-204ENST00000366497 WIZO95785 1651 aa12.87□□□□□ -0.35
NLRP3-204ENST00000366497 CEP162Q5TB80 1403 aa12.87□□□□□ -0.35
NLRP3-204ENST00000366497 CLIP1P30622 1438 aa12.86□□□□□ -0.35
NLRP3-204ENST00000366497 NEUROD1Q13562 356 aa12.84□□□□□ -0.35
NLRP3-204ENST00000366497 GOLGA3Q08378 1498 aa12.84□□□□□ -0.35
NLRP3-204ENST00000366497 SOGA1O94964 1423 aa12.83□□□□□ -0.36
NLRP3-204ENST00000366497 ARID3CA6NKF2 412 aa12.82□□□□□ -0.36
NLRP3-204ENST00000366497 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
NLRP3-204ENST00000366497 TRIM52Q96A61 297 aa12.8□□□□□ -0.36
NLRP3-204ENST00000366497 ABCC8Q09428 1581 aa12.8□□□□□ -0.36
NLRP3-204ENST00000366497 ZNF316A6NFI3 1004 aaPredicted RBP12.78□□□□□ -0.36
NLRP3-204ENST00000366497 MYT1LQ9UL68 1186 aa12.77□□□□□ -0.36
NLRP3-204ENST00000366497 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.37
NLRP3-204ENST00000366497 POLR3GLQ9BT43 218 aa12.76□□□□□ -0.37
NLRP3-204ENST00000366497 CEP164Q9UPV0 1460 aa12.75□□□□□ -0.37
NLRP3-204ENST00000366497 KIF27Q86VH2 1401 aa12.74□□□□□ -0.37
NLRP3-204ENST00000366497 NEFLP07196 543 aa12.74□□□□□ -0.37
NLRP3-204ENST00000366497 SMARCA2P51531 1590 aa12.72□□□□□ -0.37
NLRP3-204ENST00000366497 SMARCA4P51532 1647 aa12.72□□□□□ -0.37
NLRP3-204ENST00000366497 CNGB1Q14028 1251 aaPredicted RBP12.69□□□□□ -0.38
NLRP3-204ENST00000366497 ATAD2BQ9ULI0 1458 aa12.69□□□□□ -0.38
NLRP3-204ENST00000366497 CDK11AQ9UQ88 783 aaPredicted RBP12.64□□□□□ -0.39
NLRP3-204ENST00000366497 ZNF777Q9ULD5 760 aaPredicted RBP12.62□□□□□ -0.39
NLRP3-204ENST00000366497 MTUS2Q5JR59 1369 aa12.6□□□□□ -0.39
NLRP3-204ENST00000366497 CUX2O14529 1486 aa12.6□□□□□ -0.39
NLRP3-204ENST00000366497 DNAJC5BQ9UF47 199 aa12.59□□□□□ -0.39
NLRP3-204ENST00000366497 ZNF326Q5BKZ1 582 aaKnown RBP12.58□□□□□ -0.4
NLRP3-204ENST00000366497 CARMIL1Q5VZK9 1371 aa12.57□□□□□ -0.4
NLRP3-204ENST00000366497 CHIC2Q9UKJ5 165 aa12.57□□□□□ -0.4
NLRP3-204ENST00000366497 CHMP7Q8WUX9 453 aaPredicted RBP12.57□□□□□ -0.4
NLRP3-204ENST00000366497 RUSC2Q8N2Y8 1516 aa12.56□□□□□ -0.4
NLRP3-204ENST00000366497 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
NLRP3-204ENST00000366497 ANP32CO43423 234 aa12.53□□□□□ -0.4
NLRP3-204ENST00000366497 VPS8Q8N3P4 1428 aa12.53□□□□□ -0.4
NLRP3-204ENST00000366497 CADPSQ9ULU8 1353 aa12.53□□□□□ -0.4
NLRP3-204ENST00000366497 ACIN1Q9UKV3 1341 aaKnown RBP12.52□□□□□ -0.41
NLRP3-204ENST00000366497 TONSLQ96HA7 1378 aa12.51□□□□□ -0.41
NLRP3-204ENST00000366497 KANK4Q5T7N3 995 aaPredicted RBP12.48□□□□□ -0.41
NLRP3-204ENST00000366497 RAPGEF2Q9Y4G8 1499 aa12.48□□□□□ -0.41
NLRP3-204ENST00000366497 RRP7BPQ9NSQ0 103 aa12.45□□□□□ -0.42
NLRP3-204ENST00000366497 DDX10Q13206 875 aaKnown RBP12.45□□□□□ -0.42
NLRP3-204ENST00000366497 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
NLRP3-204ENST00000366497 TDRD9Q8NDG6 1382 aaKnown RBP12.44□□□□□ -0.42
NLRP3-204ENST00000366497 CCNB3Q8WWL7 1395 aa12.43□□□□□ -0.42
NLRP3-204ENST00000366497 FHAD1B1AJZ9 1412 aa12.43□□□□□ -0.42
NLRP3-204ENST00000366497 MIER1Q8N108 512 aa12.42□□□□□ -0.42
NLRP3-204ENST00000366497 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
NLRP3-204ENST00000366497 NCAPD3P42695 1498 aa12.41□□□□□ -0.42
NLRP3-204ENST00000366497 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.43
NLRP3-204ENST00000366497 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
NLRP3-204ENST00000366497 TSPY4P0CV99 314 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms