RNA–Protein interactions for RNA: ENST00000344893.4

AC008543.1-201, humanhuman

TSL 2 BASIC

Gene AC008543.1, Length 3,383 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008543.1-201ENST00000344893 NISCHQ9Y2I1 1504 aa18.13■□□□□ 0.49
AC008543.1-201ENST00000344893 DCAF8L2P0C7V8 631 aa16.19■□□□□ 0.18
AC008543.1-201ENST00000344893 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
AC008543.1-201ENST00000344893 ABCC9O60706 1549 aa15.5■□□□□ 0.07
AC008543.1-201ENST00000344893 CCDC180Q9P1Z9 1646 aa15.4■□□□□ 0.06
AC008543.1-201ENST00000344893 PELP1Q8IZL8 1130 aaKnown RBP15.28■□□□□ 0.04
AC008543.1-201ENST00000344893 HRCP23327 699 aa15.26■□□□□ 0.03
AC008543.1-201ENST00000344893 SUPT5HO00267 1087 aaKnown RBP15.21■□□□□ 0.02
AC008543.1-201ENST00000344893 ZCCHC6Q5VYS8 1495 aaKnown RBP15.13■□□□□ 0.01
AC008543.1-201ENST00000344893 PPARGC1BQ86YN6 1023 aaKnown RBP14.96□□□□□ -0.01
AC008543.1-201ENST00000344893 PABPN1Q86U42 306 aaKnown RBP eCLIP14.91□□□□□ -0.02
AC008543.1-201ENST00000344893 SCRIBQ14160 1630 aa14.84□□□□□ -0.03
AC008543.1-201ENST00000344893 PCGF6Q9BYE7 350 aa14.8□□□□□ -0.04
AC008543.1-201ENST00000344893 MYT1Q01538 1121 aa14.79□□□□□ -0.04
AC008543.1-201ENST00000344893 SCAF1Q9H7N4 1312 aaKnown RBP14.66□□□□□ -0.06
AC008543.1-201ENST00000344893 DCAF1Q9Y4B6 1507 aa14.56□□□□□ -0.08
AC008543.1-201ENST00000344893 RB1CC1Q8TDY2 1594 aa14.56□□□□□ -0.08
AC008543.1-201ENST00000344893 NACADO15069 1562 aa14.55□□□□□ -0.08
AC008543.1-201ENST00000344893 MYO15BQ96JP2 1530 aa14.44□□□□□ -0.1
AC008543.1-201ENST00000344893 CECR2Q9BXF3 1484 aa14.4□□□□□ -0.1
AC008543.1-201ENST00000344893 EHMT2Q96KQ7 1210 aa14.36□□□□□ -0.11
AC008543.1-201ENST00000344893 CHIC1Q5VXU3 224 aa14.26□□□□□ -0.13
AC008543.1-201ENST00000344893 RSF1Q96T23 1441 aaPredicted RBP14.23□□□□□ -0.13
AC008543.1-201ENST00000344893 FAM9AQ8IZU1 332 aaPredicted RBP14.2□□□□□ -0.14
AC008543.1-201ENST00000344893 MROH2BQ7Z745 1585 aa14.19□□□□□ -0.14
AC008543.1-201ENST00000344893 ZEB1P37275 1124 aaPredicted RBP14.19□□□□□ -0.14
AC008543.1-201ENST00000344893 TRIM26Q12899 539 aaPredicted RBP14.19□□□□□ -0.14
AC008543.1-201ENST00000344893 ACIN1Q9UKV3 1341 aaKnown RBP14.18□□□□□ -0.14
AC008543.1-201ENST00000344893 UNC13AQ9UPW8 1703 aa14.15□□□□□ -0.14
AC008543.1-201ENST00000344893 NEUROD1Q13562 356 aa14.14□□□□□ -0.15
AC008543.1-201ENST00000344893 GTF3C3Q9Y5Q9 886 aa14.11□□□□□ -0.15
AC008543.1-201ENST00000344893 BICRAQ9NZM4 1560 aa14.1□□□□□ -0.15
AC008543.1-201ENST00000344893 WIZO95785 1651 aa14.06□□□□□ -0.16
AC008543.1-201ENST00000344893 TRIM41Q8WV44 630 aa14.02□□□□□ -0.16
AC008543.1-201ENST00000344893 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
AC008543.1-201ENST00000344893 TTBK1Q5TCY1 1321 aaPredicted RBP13.97□□□□□ -0.17
AC008543.1-201ENST00000344893 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
AC008543.1-201ENST00000344893 CENPBP07199 599 aaPredicted RBP13.95□□□□□ -0.18
AC008543.1-201ENST00000344893 DNAJC5BQ9UF47 199 aa13.92□□□□□ -0.18
AC008543.1-201ENST00000344893 SMARCA4P51532 1647 aa13.9□□□□□ -0.18
AC008543.1-201ENST00000344893 BAZ1BQ9UIG0 1483 aaKnown RBP13.84□□□□□ -0.19
AC008543.1-201ENST00000344893 BCL11AQ9H165 835 aa13.83□□□□□ -0.2
AC008543.1-201ENST00000344893 RANGAP1P46060 587 aaPredicted RBP13.82□□□□□ -0.2
AC008543.1-201ENST00000344893 ATAD2BQ9ULI0 1458 aa13.81□□□□□ -0.2
AC008543.1-201ENST00000344893 EIF4G1Q04637 1599 aaKnown RBP13.8□□□□□ -0.2
AC008543.1-201ENST00000344893 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
AC008543.1-201ENST00000344893 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
AC008543.1-201ENST00000344893 TOP2AP11388 1531 aaKnown RBP13.69□□□□□ -0.22
AC008543.1-201ENST00000344893 ABCC8Q09428 1581 aa13.68□□□□□ -0.22
AC008543.1-201ENST00000344893 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
AC008543.1-201ENST00000344893 SMARCA2P51531 1590 aa13.65□□□□□ -0.22
AC008543.1-201ENST00000344893 YTHDC1Q96MU7 727 aaKnown RBP13.6□□□□□ -0.23
AC008543.1-201ENST00000344893 UBTFP17480 764 aaKnown RBP13.58□□□□□ -0.24
AC008543.1-201ENST00000344893 ANP32EQ9BTT0 268 aa13.58□□□□□ -0.24
AC008543.1-201ENST00000344893 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.58□□□□□ -0.24
AC008543.1-201ENST00000344893 CCER1Q8TC90 406 aaPredicted RBP13.56□□□□□ -0.24
AC008543.1-201ENST00000344893 PRKCSHP14314 528 aaPredicted RBP13.55□□□□□ -0.24
AC008543.1-201ENST00000344893 NCAPD3P42695 1498 aa13.55□□□□□ -0.24
AC008543.1-201ENST00000344893 NESP48681 1621 aa13.53□□□□□ -0.24
AC008543.1-201ENST00000344893 WRNQ14191 1432 aaPredicted RBP eCLIP13.48□□□□□ -0.25
AC008543.1-201ENST00000344893 SOGA1O94964 1423 aa13.47□□□□□ -0.25
AC008543.1-201ENST00000344893 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
AC008543.1-201ENST00000344893 RUSC2Q8N2Y8 1516 aa13.43□□□□□ -0.26
AC008543.1-201ENST00000344893 PEG3Q9GZU2 1588 aa13.42□□□□□ -0.26
AC008543.1-201ENST00000344893 CADPSQ9ULU8 1353 aa13.42□□□□□ -0.26
AC008543.1-201ENST00000344893 HMGXB3Q12766 1538 aa13.38□□□□□ -0.27
AC008543.1-201ENST00000344893 ZNF316A6NFI3 1004 aaPredicted RBP13.37□□□□□ -0.27
AC008543.1-201ENST00000344893 TSHZ2Q9NRE2 1034 aa13.37□□□□□ -0.27
AC008543.1-201ENST00000344893 MIER1Q8N108 512 aa13.35□□□□□ -0.27
AC008543.1-201ENST00000344893 ATP1B4Q9UN42 357 aaPredicted RBP13.33□□□□□ -0.28
AC008543.1-201ENST00000344893 SUPT16HQ9Y5B9 1047 aaKnown RBP13.32□□□□□ -0.28
AC008543.1-201ENST00000344893 FBLN2P98095 1184 aa13.31□□□□□ -0.28
AC008543.1-201ENST00000344893 FANCD2Q9BXW9 1451 aa13.31□□□□□ -0.28
AC008543.1-201ENST00000344893 P3H3Q8IVL6 736 aa13.3□□□□□ -0.28
AC008543.1-201ENST00000344893 CFTRP13569 1480 aa13.3□□□□□ -0.28
AC008543.1-201ENST00000344893 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
AC008543.1-201ENST00000344893 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
AC008543.1-201ENST00000344893 TDRD9Q8NDG6 1382 aaKnown RBP13.26□□□□□ -0.29
AC008543.1-201ENST00000344893 CLSPNQ9HAW4 1339 aa13.23□□□□□ -0.29
AC008543.1-201ENST00000344893 RAD54L2Q9Y4B4 1467 aa13.23□□□□□ -0.29
AC008543.1-201ENST00000344893 ERICH6Q7L0X2 663 aa13.23□□□□□ -0.29
AC008543.1-201ENST00000344893 CUX2O14529 1486 aa13.21□□□□□ -0.29
AC008543.1-201ENST00000344893 CUX1P39880 1505 aa13.21□□□□□ -0.3
AC008543.1-201ENST00000344893 PDS5BQ9NTI5 1447 aa13.2□□□□□ -0.3
AC008543.1-201ENST00000344893 CEP164Q9UPV0 1460 aa13.19□□□□□ -0.3
AC008543.1-201ENST00000344893 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
AC008543.1-201ENST00000344893 FGD5Q6ZNL6 1462 aa13.17□□□□□ -0.3
AC008543.1-201ENST00000344893 APLP2Q06481 763 aa13.12□□□□□ -0.31
AC008543.1-201ENST00000344893 KIF27Q86VH2 1401 aa13.11□□□□□ -0.31
AC008543.1-201ENST00000344893 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
AC008543.1-201ENST00000344893 URB2Q14146 1524 aaKnown RBP13.08□□□□□ -0.32
AC008543.1-201ENST00000344893 TOPBP1Q92547 1522 aa13.08□□□□□ -0.32
AC008543.1-201ENST00000344893 AQRO60306 1485 aaKnown RBP eCLIP13.07□□□□□ -0.32
AC008543.1-201ENST00000344893 TOP2BQ02880 1626 aa13.06□□□□□ -0.32
AC008543.1-201ENST00000344893 CEP162Q5TB80 1403 aa13.06□□□□□ -0.32
AC008543.1-201ENST00000344893 POLA1P09884 1462 aaPredicted RBP13.06□□□□□ -0.32
AC008543.1-201ENST00000344893 CARMIL1Q5VZK9 1371 aa13.04□□□□□ -0.32
AC008543.1-201ENST00000344893 KIF21AQ7Z4S6 1674 aa13.03□□□□□ -0.32
AC008543.1-201ENST00000344893 GOLGA3Q08378 1498 aa13.03□□□□□ -0.32
AC008543.1-201ENST00000344893 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms