RNA–Protein interactions for RNA: ENST00000369510.8

VANGL1-204, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VANGL1, Length 8,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-204ENST00000369510 PELP1Q8IZL8 1130 aaKnown RBP14.94□□□□□ -0.02
VANGL1-204ENST00000369510 MYT1Q01538 1121 aa14.4□□□□□ -0.1
VANGL1-204ENST00000369510 CCER1Q8TC90 406 aaPredicted RBP14.15□□□□□ -0.14
VANGL1-204ENST00000369510 YTHDC1Q96MU7 727 aaKnown RBP14.07□□□□□ -0.16
VANGL1-204ENST00000369510 ERICH6Q7L0X2 663 aa13.93□□□□□ -0.18
VANGL1-204ENST00000369510 DCAF8L2P0C7V8 631 aa13.85□□□□□ -0.19
VANGL1-204ENST00000369510 TTBK1Q5TCY1 1321 aaPredicted RBP13.67□□□□□ -0.22
VANGL1-204ENST00000369510 CENPBP07199 599 aaPredicted RBP13.33□□□□□ -0.28
VANGL1-204ENST00000369510 FAM9AQ8IZU1 332 aaPredicted RBP13.3□□□□□ -0.28
VANGL1-204ENST00000369510 DAXXQ9UER7 740 aaPredicted RBP13.25□□□□□ -0.29
VANGL1-204ENST00000369510 NEFLP07196 543 aa13.2□□□□□ -0.3
VANGL1-204ENST00000369510 SUPT5HO00267 1087 aaKnown RBP13.17□□□□□ -0.3
VANGL1-204ENST00000369510 APLP2Q06481 763 aa13.06□□□□□ -0.32
VANGL1-204ENST00000369510 EHMT2Q96KQ7 1210 aa12.99□□□□□ -0.33
VANGL1-204ENST00000369510 CLSPNQ9HAW4 1339 aa12.97□□□□□ -0.33
VANGL1-204ENST00000369510 SHROOM4Q9ULL8 1493 aa12.95□□□□□ -0.34
VANGL1-204ENST00000369510 NISCHQ9Y2I1 1504 aa12.91□□□□□ -0.34
VANGL1-204ENST00000369510 GLIPR1L2Q4G1C9 344 aa12.89□□□□□ -0.35
VANGL1-204ENST00000369510 ZEB1P37275 1124 aaPredicted RBP12.88□□□□□ -0.35
VANGL1-204ENST00000369510 RTL5Q5HYW3 569 aaPredicted RBP12.87□□□□□ -0.35
VANGL1-204ENST00000369510 ZNF316A6NFI3 1004 aaPredicted RBP12.76□□□□□ -0.37
VANGL1-204ENST00000369510 PCGF6Q9BYE7 350 aa12.66□□□□□ -0.38
VANGL1-204ENST00000369510 RANGAP1P46060 587 aaPredicted RBP12.62□□□□□ -0.39
VANGL1-204ENST00000369510 ANP32BQ92688 251 aaKnown RBP12.47□□□□□ -0.41
VANGL1-204ENST00000369510 NEFMP07197 916 aa12.39□□□□□ -0.43
VANGL1-204ENST00000369510 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
VANGL1-204ENST00000369510 ZBTB47Q9UFB7 747 aaPredicted RBP12.35□□□□□ -0.43
VANGL1-204ENST00000369510 TNNT2P45379 298 aaPredicted RBP12.33□□□□□ -0.44
VANGL1-204ENST00000369510 CDK11BP21127 795 aaKnown RBP12.28□□□□□ -0.44
VANGL1-204ENST00000369510 CDK11AQ9UQ88 783 aaPredicted RBP12.28□□□□□ -0.44
VANGL1-204ENST00000369510 POLR3GLQ9BT43 218 aa12.27□□□□□ -0.45
VANGL1-204ENST00000369510 PPARGC1BQ86YN6 1023 aaKnown RBP12.2□□□□□ -0.46
VANGL1-204ENST00000369510 TRIM44Q96DX7 344 aaPredicted RBP12.18□□□□□ -0.46
VANGL1-204ENST00000369510 ATP1B4Q9UN42 357 aaPredicted RBP12.16□□□□□ -0.46
VANGL1-204ENST00000369510 NCLP19338 710 aaKnown RBP12.12□□□□□ -0.47
VANGL1-204ENST00000369510 HRCP23327 699 aa12.12□□□□□ -0.47
VANGL1-204ENST00000369510 EIF5BO60841 1220 aaKnown RBP12.11□□□□□ -0.47
VANGL1-204ENST00000369510 TRIM41Q8WV44 630 aa12.04□□□□□ -0.48
VANGL1-204ENST00000369510 ANP32AP39687 249 aaKnown RBP12.01□□□□□ -0.49
VANGL1-204ENST00000369510 UBTFP17480 764 aaKnown RBP12□□□□□ -0.49
VANGL1-204ENST00000369510 ANP32EQ9BTT0 268 aa11.96□□□□□ -0.49
VANGL1-204ENST00000369510 LOC105371045A0A1W2PR82 267 aa11.96□□□□□ -0.5
VANGL1-204ENST00000369510 UPF2Q9HAU5 1272 aaKnown RBP11.93□□□□□ -0.5
VANGL1-204ENST00000369510 CALRP27797 417 aaKnown RBP11.92□□□□□ -0.5
VANGL1-204ENST00000369510 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
VANGL1-204ENST00000369510 HSP90AA1P07900 732 aaKnown RBP11.91□□□□□ -0.5
VANGL1-204ENST00000369510 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
VANGL1-204ENST00000369510 ZNF326Q5BKZ1 582 aaKnown RBP11.83□□□□□ -0.52
VANGL1-204ENST00000369510 CANXP27824 592 aaKnown RBP11.81□□□□□ -0.52
VANGL1-204ENST00000369510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.8□□□□□ -0.52
VANGL1-204ENST00000369510 HNRNPUL2Q1KMD3 747 aaKnown RBP11.8□□□□□ -0.52
VANGL1-204ENST00000369510 SLC4A1APQ9BWU0 796 aaKnown RBP11.79□□□□□ -0.52
VANGL1-204ENST00000369510 PTMSP20962 102 aa11.77□□□□□ -0.52
VANGL1-204ENST00000369510 USP35Q9P2H5 1018 aa11.75□□□□□ -0.53
VANGL1-204ENST00000369510 CHIC1Q5VXU3 224 aa11.75□□□□□ -0.53
VANGL1-204ENST00000369510 NRDCO43847 1150 aa11.73□□□□□ -0.53
VANGL1-204ENST00000369510 GOLGA6L6A8MZA4 724 aa11.73□□□□□ -0.53
VANGL1-204ENST00000369510 GOLGA6L22H0YM25 854 aa11.7□□□□□ -0.54
VANGL1-204ENST00000369510 ZRSR1Q15695 479 aaKnown RBP11.69□□□□□ -0.54
VANGL1-204ENST00000369510 ITGAEP38570 1179 aa11.69□□□□□ -0.54
VANGL1-204ENST00000369510 GTF3C3Q9Y5Q9 886 aa11.68□□□□□ -0.54
VANGL1-204ENST00000369510 CNGB1Q14028 1251 aaPredicted RBP11.67□□□□□ -0.54
VANGL1-204ENST00000369510 ERICH6BQ5W0A0 696 aa11.65□□□□□ -0.54
VANGL1-204ENST00000369510 DIEXFQ68CQ4 756 aaKnown RBP11.64□□□□□ -0.55
VANGL1-204ENST00000369510 BCANQ96GW7 911 aa11.63□□□□□ -0.55
VANGL1-204ENST00000369510 CHAF1AQ13111 956 aaPredicted RBP11.61□□□□□ -0.55
VANGL1-204ENST00000369510 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
VANGL1-204ENST00000369510 TNNT3P45378 269 aaPredicted RBP11.55□□□□□ -0.56
VANGL1-204ENST00000369510 SETQ01105 290 aaPredicted RBP11.55□□□□□ -0.56
VANGL1-204ENST00000369510 ANP32CO43423 234 aa11.54□□□□□ -0.56
VANGL1-204ENST00000369510 BECN1Q14457 450 aa11.54□□□□□ -0.56
VANGL1-204ENST00000369510 SLC24A1O60721 1099 aa11.53□□□□□ -0.56
VANGL1-204ENST00000369510 DNTTIP2Q5QJE6 756 aaKnown RBP11.53□□□□□ -0.56
VANGL1-204ENST00000369510 PTMAP06454 111 aaKnown RBP11.51□□□□□ -0.57
VANGL1-204ENST00000369510 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.51□□□□□ -0.57
VANGL1-204ENST00000369510 DDRGK1Q96HY6 314 aa11.5□□□□□ -0.57
VANGL1-204ENST00000369510 ARID4BQ4LE39 1312 aaPredicted RBP11.5□□□□□ -0.57
VANGL1-204ENST00000369510 GOLGA6L1Q8N7Z2 621 aa11.49□□□□□ -0.57
VANGL1-204ENST00000369510 KIAA2012Q0VF49 1180 aa11.47□□□□□ -0.57
VANGL1-204ENST00000369510 A0A0U1RQG5 324 aaPredicted RBP11.47□□□□□ -0.57
VANGL1-204ENST00000369510 MYH16Q9H6N6 1097 aa11.46□□□□□ -0.57
VANGL1-204ENST00000369510 GOLGA6L4A6NEF3 574 aa11.45□□□□□ -0.58
VANGL1-204ENST00000369510 ACIN1Q9UKV3 1341 aaKnown RBP11.45□□□□□ -0.58
VANGL1-204ENST00000369510 STK11IPQ8N1F8 1099 aa11.44□□□□□ -0.58
VANGL1-204ENST00000369510 NOC3LQ8WTT2 800 aaKnown RBP11.39□□□□□ -0.59
VANGL1-204ENST00000369510 CASC1Q6TDU7 716 aa11.38□□□□□ -0.59
VANGL1-204ENST00000369510 NEUROD1Q13562 356 aa11.38□□□□□ -0.59
VANGL1-204ENST00000369510 NPM2Q86SE8 214 aaKnown RBP11.37□□□□□ -0.59
VANGL1-204ENST00000369510 NAP1L5Q96NT1 182 aaPredicted RBP11.36□□□□□ -0.59
VANGL1-204ENST00000369510 LAS1LQ9Y4W2 734 aaKnown RBP11.35□□□□□ -0.59
VANGL1-204ENST00000369510 ABCC9O60706 1549 aa11.34□□□□□ -0.59
VANGL1-204ENST00000369510 SCAF1Q9H7N4 1312 aaKnown RBP11.34□□□□□ -0.59
VANGL1-204ENST00000369510 FAM50AQ14320 339 aaKnown RBP11.34□□□□□ -0.59
VANGL1-204ENST00000369510 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
VANGL1-204ENST00000369510 RRP12Q5JTH9 1297 aaKnown RBP11.29□□□□□ -0.6
VANGL1-204ENST00000369510 FBLN2P98095 1184 aa11.29□□□□□ -0.6
VANGL1-204ENST00000369510 HMMRO75330 724 aa11.29□□□□□ -0.6
VANGL1-204ENST00000369510 MSNP26038 577 aaKnown RBP11.28□□□□□ -0.6
VANGL1-204ENST00000369510 PPM1GO15355 546 aaPredicted RBP11.28□□□□□ -0.6
VANGL1-204ENST00000369510 NEFHP12036 1026 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms