RNA–Protein interactions for RNA: ENST00000310455.3

PPP1R3B-201, Transcript of protein phosphatase 1 regulatory subunit 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1R3B, Length 5,548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3B-201ENST00000310455 NISCHQ9Y2I1 1504 aa16.99■□□□□ 0.31
PPP1R3B-201ENST00000310455 DCAF8L2P0C7V8 631 aa15.83■□□□□ 0.12
PPP1R3B-201ENST00000310455 PELP1Q8IZL8 1130 aaKnown RBP15.39■□□□□ 0.05
PPP1R3B-201ENST00000310455 MYT1Q01538 1121 aa15.15■□□□□ 0.02
PPP1R3B-201ENST00000310455 SUPT5HO00267 1087 aaKnown RBP15.08■□□□□ 0
PPP1R3B-201ENST00000310455 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
PPP1R3B-201ENST00000310455 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
PPP1R3B-201ENST00000310455 HRCP23327 699 aa14.92□□□□□ -0.02
PPP1R3B-201ENST00000310455 ZEB1P37275 1124 aaPredicted RBP14.73□□□□□ -0.05
PPP1R3B-201ENST00000310455 CENPBP07199 599 aaPredicted RBP14.65□□□□□ -0.06
PPP1R3B-201ENST00000310455 PPARGC1BQ86YN6 1023 aaKnown RBP14.56□□□□□ -0.08
PPP1R3B-201ENST00000310455 CCDC180Q9P1Z9 1646 aa14.51□□□□□ -0.09
PPP1R3B-201ENST00000310455 TRIM26Q12899 539 aaPredicted RBP14.38□□□□□ -0.11
PPP1R3B-201ENST00000310455 EHMT2Q96KQ7 1210 aa14.33□□□□□ -0.12
PPP1R3B-201ENST00000310455 ABCC9O60706 1549 aa14.27□□□□□ -0.12
PPP1R3B-201ENST00000310455 CCER1Q8TC90 406 aaPredicted RBP14.25□□□□□ -0.13
PPP1R3B-201ENST00000310455 YTHDC1Q96MU7 727 aaKnown RBP14.22□□□□□ -0.13
PPP1R3B-201ENST00000310455 FAM9AQ8IZU1 332 aaPredicted RBP14.22□□□□□ -0.13
PPP1R3B-201ENST00000310455 ERICH6Q7L0X2 663 aa14.16□□□□□ -0.14
PPP1R3B-201ENST00000310455 ZCCHC6Q5VYS8 1495 aaKnown RBP14.15□□□□□ -0.14
PPP1R3B-201ENST00000310455 APLP2Q06481 763 aa14.13□□□□□ -0.15
PPP1R3B-201ENST00000310455 TRIM41Q8WV44 630 aa14.11□□□□□ -0.15
PPP1R3B-201ENST00000310455 CHIC1Q5VXU3 224 aa14.11□□□□□ -0.15
PPP1R3B-201ENST00000310455 GTF3C3Q9Y5Q9 886 aa14.07□□□□□ -0.16
PPP1R3B-201ENST00000310455 SCAF1Q9H7N4 1312 aaKnown RBP14.03□□□□□ -0.16
PPP1R3B-201ENST00000310455 ACIN1Q9UKV3 1341 aaKnown RBP14.02□□□□□ -0.16
PPP1R3B-201ENST00000310455 TTBK1Q5TCY1 1321 aaPredicted RBP14.01□□□□□ -0.17
PPP1R3B-201ENST00000310455 LOC105371045A0A1W2PR82 267 aa14□□□□□ -0.17
PPP1R3B-201ENST00000310455 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
PPP1R3B-201ENST00000310455 RB1CC1Q8TDY2 1594 aa13.9□□□□□ -0.19
PPP1R3B-201ENST00000310455 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
PPP1R3B-201ENST00000310455 NACADO15069 1562 aa13.88□□□□□ -0.19
PPP1R3B-201ENST00000310455 NEFLP07196 543 aa13.85□□□□□ -0.19
PPP1R3B-201ENST00000310455 PABPN1Q86U42 306 aaKnown RBP eCLIP13.79□□□□□ -0.2
PPP1R3B-201ENST00000310455 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.78□□□□□ -0.2
PPP1R3B-201ENST00000310455 UBTFP17480 764 aaKnown RBP13.77□□□□□ -0.2
PPP1R3B-201ENST00000310455 SCRIBQ14160 1630 aa13.77□□□□□ -0.2
PPP1R3B-201ENST00000310455 NEUROD1Q13562 356 aa13.74□□□□□ -0.21
PPP1R3B-201ENST00000310455 MYO15BQ96JP2 1530 aa13.71□□□□□ -0.21
PPP1R3B-201ENST00000310455 ZNF316A6NFI3 1004 aaPredicted RBP13.59□□□□□ -0.23
PPP1R3B-201ENST00000310455 CLSPNQ9HAW4 1339 aa13.53□□□□□ -0.24
PPP1R3B-201ENST00000310455 RANGAP1P46060 587 aaPredicted RBP13.52□□□□□ -0.25
PPP1R3B-201ENST00000310455 ATP1B4Q9UN42 357 aaPredicted RBP13.52□□□□□ -0.25
PPP1R3B-201ENST00000310455 BCANQ96GW7 911 aa13.49□□□□□ -0.25
PPP1R3B-201ENST00000310455 ANP32EQ9BTT0 268 aa13.44□□□□□ -0.26
PPP1R3B-201ENST00000310455 HNRNPUL2Q1KMD3 747 aaKnown RBP13.43□□□□□ -0.26
PPP1R3B-201ENST00000310455 RTL5Q5HYW3 569 aaPredicted RBP13.41□□□□□ -0.26
PPP1R3B-201ENST00000310455 BCL11AQ9H165 835 aa13.4□□□□□ -0.26
PPP1R3B-201ENST00000310455 BAZ1AQ9NRL2 1556 aaPredicted RBP13.38□□□□□ -0.27
PPP1R3B-201ENST00000310455 RSF1Q96T23 1441 aaPredicted RBP13.33□□□□□ -0.27
PPP1R3B-201ENST00000310455 CDK11AQ9UQ88 783 aaPredicted RBP13.33□□□□□ -0.28
PPP1R3B-201ENST00000310455 MYT1LQ9UL68 1186 aa13.28□□□□□ -0.28
PPP1R3B-201ENST00000310455 BAZ1BQ9UIG0 1483 aaKnown RBP13.27□□□□□ -0.28
PPP1R3B-201ENST00000310455 MIER1Q8N108 512 aa13.25□□□□□ -0.29
PPP1R3B-201ENST00000310455 CSRNP3Q8WYN3 585 aa13.25□□□□□ -0.29
PPP1R3B-201ENST00000310455 FKBP8Q14318 412 aa13.23□□□□□ -0.29
PPP1R3B-201ENST00000310455 DAXXQ9UER7 740 aaPredicted RBP13.23□□□□□ -0.29
PPP1R3B-201ENST00000310455 EEA1Q15075 1411 aa13.2□□□□□ -0.3
PPP1R3B-201ENST00000310455 SMARCA2P51531 1590 aa13.17□□□□□ -0.3
PPP1R3B-201ENST00000310455 SUPT16HQ9Y5B9 1047 aaKnown RBP13.13□□□□□ -0.31
PPP1R3B-201ENST00000310455 ITGAEP38570 1179 aa13.13□□□□□ -0.31
PPP1R3B-201ENST00000310455 ANP32CO43423 234 aa13.12□□□□□ -0.31
PPP1R3B-201ENST00000310455 ANP32AP39687 249 aaKnown RBP13.06□□□□□ -0.32
PPP1R3B-201ENST00000310455 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
PPP1R3B-201ENST00000310455 WRNQ14191 1432 aaPredicted RBP eCLIP13.05□□□□□ -0.32
PPP1R3B-201ENST00000310455 NBR1Q14596 966 aa13.02□□□□□ -0.32
PPP1R3B-201ENST00000310455 FBLN2P98095 1184 aa13.01□□□□□ -0.33
PPP1R3B-201ENST00000310455 EIF5BO60841 1220 aaKnown RBP13□□□□□ -0.33
PPP1R3B-201ENST00000310455 TOP2AP11388 1531 aaKnown RBP13□□□□□ -0.33
PPP1R3B-201ENST00000310455 MROH2BQ7Z745 1585 aa13□□□□□ -0.33
PPP1R3B-201ENST00000310455 TSHZ2Q9NRE2 1034 aa12.98□□□□□ -0.33
PPP1R3B-201ENST00000310455 KIF27Q86VH2 1401 aa12.96□□□□□ -0.33
PPP1R3B-201ENST00000310455 GOLGA3Q08378 1498 aa12.96□□□□□ -0.34
PPP1R3B-201ENST00000310455 FAM50AQ14320 339 aaKnown RBP12.96□□□□□ -0.34
PPP1R3B-201ENST00000310455 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
PPP1R3B-201ENST00000310455 GLIPR1L2Q4G1C9 344 aa12.93□□□□□ -0.34
PPP1R3B-201ENST00000310455 CEP164Q9UPV0 1460 aa12.91□□□□□ -0.34
PPP1R3B-201ENST00000310455 CCDC88BA6NC98 1476 aa12.89□□□□□ -0.35
PPP1R3B-201ENST00000310455 PDS5BQ9NTI5 1447 aa12.88□□□□□ -0.35
PPP1R3B-201ENST00000310455 RBM19Q9Y4C8 960 aaKnown RBP12.88□□□□□ -0.35
PPP1R3B-201ENST00000310455 NPM2Q86SE8 214 aaKnown RBP12.88□□□□□ -0.35
PPP1R3B-201ENST00000310455 POLR3GLQ9BT43 218 aa12.87□□□□□ -0.35
PPP1R3B-201ENST00000310455 ZBTB47Q9UFB7 747 aaPredicted RBP12.87□□□□□ -0.35
PPP1R3B-201ENST00000310455 DEKP35659 375 aaKnown RBP12.87□□□□□ -0.35
PPP1R3B-201ENST00000310455 ERCC6Q03468 1493 aa12.86□□□□□ -0.35
PPP1R3B-201ENST00000310455 ATAD2BQ9ULI0 1458 aa12.86□□□□□ -0.35
PPP1R3B-201ENST00000310455 TRIM52Q96A61 297 aa12.85□□□□□ -0.35
PPP1R3B-201ENST00000310455 CLIP1P30622 1438 aa12.85□□□□□ -0.35
PPP1R3B-201ENST00000310455 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
PPP1R3B-201ENST00000310455 CNGB1Q14028 1251 aaPredicted RBP12.84□□□□□ -0.35
PPP1R3B-201ENST00000310455 CHMP7Q8WUX9 453 aaPredicted RBP12.84□□□□□ -0.35
PPP1R3B-201ENST00000310455 TNIKQ9UKE5 1360 aa12.83□□□□□ -0.36
PPP1R3B-201ENST00000310455 HNRNPUQ00839 825 aaKnown RBP eCLIP12.82□□□□□ -0.36
PPP1R3B-201ENST00000310455 WIZO95785 1651 aa12.81□□□□□ -0.36
PPP1R3B-201ENST00000310455 IRX6P78412 446 aaPredicted RBP12.81□□□□□ -0.36
PPP1R3B-201ENST00000310455 P3H3Q8IVL6 736 aa12.8□□□□□ -0.36
PPP1R3B-201ENST00000310455 CEP162Q5TB80 1403 aa12.79□□□□□ -0.36
PPP1R3B-201ENST00000310455 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
PPP1R3B-201ENST00000310455 NOP58Q9Y2X3 529 aaKnown RBP12.78□□□□□ -0.36
PPP1R3B-201ENST00000310455 CADPSQ9ULU8 1353 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms