RNA–Protein interactions for RNA: ENST00000396280.9

TRPM3-211, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRPM3, Length 4,671 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-211ENST00000396280 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
TRPM3-211ENST00000396280 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
TRPM3-211ENST00000396280 SUPT5HO00267 1087 aaKnown RBP15.99■□□□□ 0.15
TRPM3-211ENST00000396280 SHROOM4Q9ULL8 1493 aa15.94■□□□□ 0.14
TRPM3-211ENST00000396280 PCGF6Q9BYE7 350 aa15.26■□□□□ 0.03
TRPM3-211ENST00000396280 CHIC1Q5VXU3 224 aa15.1■□□□□ 0.01
TRPM3-211ENST00000396280 HRCP23327 699 aa15.07■□□□□ 0
TRPM3-211ENST00000396280 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
TRPM3-211ENST00000396280 FAM9AQ8IZU1 332 aaPredicted RBP14.89□□□□□ -0.03
TRPM3-211ENST00000396280 ZEB1P37275 1124 aaPredicted RBP14.87□□□□□ -0.03
TRPM3-211ENST00000396280 TRIM41Q8WV44 630 aa14.87□□□□□ -0.03
TRPM3-211ENST00000396280 TRIM26Q12899 539 aaPredicted RBP14.82□□□□□ -0.04
TRPM3-211ENST00000396280 ZCCHC6Q5VYS8 1495 aaKnown RBP14.81□□□□□ -0.04
TRPM3-211ENST00000396280 LOC105371045A0A1W2PR82 267 aa14.81□□□□□ -0.04
TRPM3-211ENST00000396280 PPARGC1BQ86YN6 1023 aaKnown RBP14.69□□□□□ -0.06
TRPM3-211ENST00000396280 CCDC180Q9P1Z9 1646 aa14.63□□□□□ -0.07
TRPM3-211ENST00000396280 CCER1Q8TC90 406 aaPredicted RBP14.55□□□□□ -0.08
TRPM3-211ENST00000396280 PELP1Q8IZL8 1130 aaKnown RBP14.52□□□□□ -0.09
TRPM3-211ENST00000396280 MYO15BQ96JP2 1530 aa14.51□□□□□ -0.09
TRPM3-211ENST00000396280 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
TRPM3-211ENST00000396280 TTBK1Q5TCY1 1321 aaPredicted RBP14.48□□□□□ -0.09
TRPM3-211ENST00000396280 CENPBP07199 599 aaPredicted RBP14.44□□□□□ -0.1
TRPM3-211ENST00000396280 APLP2Q06481 763 aa14.44□□□□□ -0.1
TRPM3-211ENST00000396280 UBTFP17480 764 aaKnown RBP14.35□□□□□ -0.11
TRPM3-211ENST00000396280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.22□□□□□ -0.13
TRPM3-211ENST00000396280 SCRIBQ14160 1630 aa14.17□□□□□ -0.14
TRPM3-211ENST00000396280 RANGAP1P46060 587 aaPredicted RBP14.15□□□□□ -0.14
TRPM3-211ENST00000396280 ABCC9O60706 1549 aa14.15□□□□□ -0.14
TRPM3-211ENST00000396280 DIEXFQ68CQ4 756 aaKnown RBP14.12□□□□□ -0.15
TRPM3-211ENST00000396280 RSF1Q96T23 1441 aaPredicted RBP14.12□□□□□ -0.15
TRPM3-211ENST00000396280 YTHDC1Q96MU7 727 aaKnown RBP14.1□□□□□ -0.15
TRPM3-211ENST00000396280 MYT1Q01538 1121 aa14.03□□□□□ -0.16
TRPM3-211ENST00000396280 HNRNPUL2Q1KMD3 747 aaKnown RBP14.03□□□□□ -0.16
TRPM3-211ENST00000396280 ACIN1Q9UKV3 1341 aaKnown RBP13.96□□□□□ -0.17
TRPM3-211ENST00000396280 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
TRPM3-211ENST00000396280 GTF3C3Q9Y5Q9 886 aa13.93□□□□□ -0.18
TRPM3-211ENST00000396280 RB1CC1Q8TDY2 1594 aa13.92□□□□□ -0.18
TRPM3-211ENST00000396280 ZNF316A6NFI3 1004 aaPredicted RBP13.91□□□□□ -0.18
TRPM3-211ENST00000396280 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
TRPM3-211ENST00000396280 PABPN1Q86U42 306 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRPM3-211ENST00000396280 NACADO15069 1562 aa13.82□□□□□ -0.2
TRPM3-211ENST00000396280 ATP1B4Q9UN42 357 aaPredicted RBP13.81□□□□□ -0.2
TRPM3-211ENST00000396280 NEUROD1Q13562 356 aa13.78□□□□□ -0.2
TRPM3-211ENST00000396280 CECR2Q9BXF3 1484 aa13.78□□□□□ -0.2
TRPM3-211ENST00000396280 ITGAEP38570 1179 aa13.77□□□□□ -0.21
TRPM3-211ENST00000396280 NEFLP07196 543 aa13.73□□□□□ -0.21
TRPM3-211ENST00000396280 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
TRPM3-211ENST00000396280 EEA1Q15075 1411 aa13.71□□□□□ -0.21
TRPM3-211ENST00000396280 MROH2BQ7Z745 1585 aa13.69□□□□□ -0.22
TRPM3-211ENST00000396280 TNIKQ9UKE5 1360 aa13.68□□□□□ -0.22
TRPM3-211ENST00000396280 BAZ1AQ9NRL2 1556 aaPredicted RBP13.67□□□□□ -0.22
TRPM3-211ENST00000396280 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
TRPM3-211ENST00000396280 CLIP1P30622 1438 aa13.59□□□□□ -0.23
TRPM3-211ENST00000396280 MIER1Q8N108 512 aa13.56□□□□□ -0.24
TRPM3-211ENST00000396280 WRNQ14191 1432 aaPredicted RBP eCLIP13.55□□□□□ -0.24
TRPM3-211ENST00000396280 ERICH6Q7L0X2 663 aa13.55□□□□□ -0.24
TRPM3-211ENST00000396280 WIZO95785 1651 aa13.55□□□□□ -0.24
TRPM3-211ENST00000396280 SOGA1O94964 1423 aa13.54□□□□□ -0.24
TRPM3-211ENST00000396280 FAM50AQ14320 339 aaKnown RBP13.53□□□□□ -0.24
TRPM3-211ENST00000396280 CLSPNQ9HAW4 1339 aa13.52□□□□□ -0.25
TRPM3-211ENST00000396280 CEP164Q9UPV0 1460 aa13.51□□□□□ -0.25
TRPM3-211ENST00000396280 CCDC88BA6NC98 1476 aa13.51□□□□□ -0.25
TRPM3-211ENST00000396280 ABCC8Q09428 1581 aa13.49□□□□□ -0.25
TRPM3-211ENST00000396280 TOP2AP11388 1531 aaKnown RBP13.45□□□□□ -0.26
TRPM3-211ENST00000396280 ANP32CO43423 234 aa13.4□□□□□ -0.26
TRPM3-211ENST00000396280 BCANQ96GW7 911 aa13.39□□□□□ -0.27
TRPM3-211ENST00000396280 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
TRPM3-211ENST00000396280 BAZ1BQ9UIG0 1483 aaKnown RBP13.36□□□□□ -0.27
TRPM3-211ENST00000396280 P3H3Q8IVL6 736 aa13.34□□□□□ -0.27
TRPM3-211ENST00000396280 SMARCA4P51532 1647 aa13.31□□□□□ -0.28
TRPM3-211ENST00000396280 DDX10Q13206 875 aaKnown RBP13.3□□□□□ -0.28
TRPM3-211ENST00000396280 RUSC2Q8N2Y8 1516 aa13.29□□□□□ -0.28
TRPM3-211ENST00000396280 TRIM52Q96A61 297 aa13.27□□□□□ -0.28
TRPM3-211ENST00000396280 KIF27Q86VH2 1401 aa13.27□□□□□ -0.29
TRPM3-211ENST00000396280 FKBP8Q14318 412 aa13.26□□□□□ -0.29
TRPM3-211ENST00000396280 SMARCA2P51531 1590 aa13.25□□□□□ -0.29
TRPM3-211ENST00000396280 TONSLQ96HA7 1378 aa13.23□□□□□ -0.29
TRPM3-211ENST00000396280 POLR3GLQ9BT43 218 aa13.22□□□□□ -0.29
TRPM3-211ENST00000396280 CCNB3Q8WWL7 1395 aa13.21□□□□□ -0.3
TRPM3-211ENST00000396280 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
TRPM3-211ENST00000396280 KANK4Q5T7N3 995 aaPredicted RBP13.18□□□□□ -0.3
TRPM3-211ENST00000396280 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
TRPM3-211ENST00000396280 SUPT16HQ9Y5B9 1047 aaKnown RBP13.17□□□□□ -0.3
TRPM3-211ENST00000396280 CNGB1Q14028 1251 aaPredicted RBP13.16□□□□□ -0.3
TRPM3-211ENST00000396280 HIRIP3Q9BW71 556 aaPredicted RBP13.12□□□□□ -0.31
TRPM3-211ENST00000396280 HNRNPUQ00839 825 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRPM3-211ENST00000396280 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
TRPM3-211ENST00000396280 DHX57Q6P158 1386 aaKnown RBP13.11□□□□□ -0.31
TRPM3-211ENST00000396280 MTUS2Q5JR59 1369 aa13.1□□□□□ -0.31
TRPM3-211ENST00000396280 SIN3AQ96ST3 1273 aa13.1□□□□□ -0.31
TRPM3-211ENST00000396280 TIMELESSQ9UNS1 1208 aa13.08□□□□□ -0.32
TRPM3-211ENST00000396280 SETD5Q9C0A6 1442 aa13.06□□□□□ -0.32
TRPM3-211ENST00000396280 FHAD1B1AJZ9 1412 aa13.06□□□□□ -0.32
TRPM3-211ENST00000396280 CARMIL1Q5VZK9 1371 aa13.05□□□□□ -0.32
TRPM3-211ENST00000396280 KIF21BO75037 1637 aa13.05□□□□□ -0.32
TRPM3-211ENST00000396280 CUX2O14529 1486 aa13.05□□□□□ -0.32
TRPM3-211ENST00000396280 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
TRPM3-211ENST00000396280 ZNF326Q5BKZ1 582 aaKnown RBP13.02□□□□□ -0.33
TRPM3-211ENST00000396280 CHIC2Q9UKJ5 165 aa13.02□□□□□ -0.33
TRPM3-211ENST00000396280 ANP32EQ9BTT0 268 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms