RNA–Protein interactions for RNA: ENST00000272645.8

POLR2D-201, Transcript of RNA polymerase II subunit D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2D, Length 5,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2D-201ENST00000272645 NISCHQ9Y2I1 1504 aa19.21■□□□□ 0.67
POLR2D-201ENST00000272645 SHROOM4Q9ULL8 1493 aa16.51■□□□□ 0.23
POLR2D-201ENST00000272645 MYO15BQ96JP2 1530 aa16.5■□□□□ 0.23
POLR2D-201ENST00000272645 ZCCHC6Q5VYS8 1495 aaKnown RBP16.37■□□□□ 0.21
POLR2D-201ENST00000272645 HRCP23327 699 aa16.32■□□□□ 0.2
POLR2D-201ENST00000272645 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.2
POLR2D-201ENST00000272645 CHIC1Q5VXU3 224 aa16.22■□□□□ 0.19
POLR2D-201ENST00000272645 CCDC180Q9P1Z9 1646 aa16.11■□□□□ 0.17
POLR2D-201ENST00000272645 PPARGC1BQ86YN6 1023 aaKnown RBP16.04■□□□□ 0.16
POLR2D-201ENST00000272645 PCGF6Q9BYE7 350 aa15.96■□□□□ 0.15
POLR2D-201ENST00000272645 DCAF1Q9Y4B6 1507 aa15.91■□□□□ 0.14
POLR2D-201ENST00000272645 LOC105371045A0A1W2PR82 267 aa15.76■□□□□ 0.11
POLR2D-201ENST00000272645 DCAF8L2P0C7V8 631 aa15.72■□□□□ 0.11
POLR2D-201ENST00000272645 TRIM26Q12899 539 aaPredicted RBP15.53■□□□□ 0.08
POLR2D-201ENST00000272645 ABCC9O60706 1549 aa15.52■□□□□ 0.07
POLR2D-201ENST00000272645 SCAF1Q9H7N4 1312 aaKnown RBP15.39■□□□□ 0.05
POLR2D-201ENST00000272645 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
POLR2D-201ENST00000272645 RB1CC1Q8TDY2 1594 aa15.33■□□□□ 0.04
POLR2D-201ENST00000272645 ZEB1P37275 1124 aaPredicted RBP15.17■□□□□ 0.02
POLR2D-201ENST00000272645 SCRIBQ14160 1630 aa15.15■□□□□ 0.02
POLR2D-201ENST00000272645 EIF4G1Q04637 1599 aaKnown RBP15.12■□□□□ 0.01
POLR2D-201ENST00000272645 PELP1Q8IZL8 1130 aaKnown RBP15.09■□□□□ 0.01
POLR2D-201ENST00000272645 TRIM41Q8WV44 630 aa15.06■□□□□ 0
POLR2D-201ENST00000272645 CECR2Q9BXF3 1484 aa15.05■□□□□ -0
POLR2D-201ENST00000272645 MROH2BQ7Z745 1585 aa15.02■□□□□ -0
POLR2D-201ENST00000272645 NACADO15069 1562 aa15.01□□□□□ -0.01
POLR2D-201ENST00000272645 NEUROD1Q13562 356 aa14.99□□□□□ -0.01
POLR2D-201ENST00000272645 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
POLR2D-201ENST00000272645 WIZO95785 1651 aa14.97□□□□□ -0.01
POLR2D-201ENST00000272645 ACIN1Q9UKV3 1341 aaKnown RBP14.94□□□□□ -0.02
POLR2D-201ENST00000272645 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.89□□□□□ -0.03
POLR2D-201ENST00000272645 WRNQ14191 1432 aaPredicted RBP eCLIP14.85□□□□□ -0.03
POLR2D-201ENST00000272645 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
POLR2D-201ENST00000272645 EHMT2Q96KQ7 1210 aa14.84□□□□□ -0.03
POLR2D-201ENST00000272645 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.05
POLR2D-201ENST00000272645 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
POLR2D-201ENST00000272645 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
POLR2D-201ENST00000272645 DIEXFQ68CQ4 756 aaKnown RBP14.72□□□□□ -0.05
POLR2D-201ENST00000272645 CCER1Q8TC90 406 aaPredicted RBP14.67□□□□□ -0.06
POLR2D-201ENST00000272645 CEP162Q5TB80 1403 aa14.67□□□□□ -0.06
POLR2D-201ENST00000272645 RUSC2Q8N2Y8 1516 aa14.67□□□□□ -0.06
POLR2D-201ENST00000272645 SOGA1O94964 1423 aa14.67□□□□□ -0.06
POLR2D-201ENST00000272645 SMARCA2P51531 1590 aa14.65□□□□□ -0.06
POLR2D-201ENST00000272645 TOP2AP11388 1531 aaKnown RBP14.62□□□□□ -0.07
POLR2D-201ENST00000272645 TNIKQ9UKE5 1360 aa14.6□□□□□ -0.07
POLR2D-201ENST00000272645 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.07
POLR2D-201ENST00000272645 UNC13AQ9UPW8 1703 aa14.57□□□□□ -0.08
POLR2D-201ENST00000272645 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
POLR2D-201ENST00000272645 ZNF316A6NFI3 1004 aaPredicted RBP14.51□□□□□ -0.09
POLR2D-201ENST00000272645 MIER1Q8N108 512 aa14.49□□□□□ -0.09
POLR2D-201ENST00000272645 CENPBP07199 599 aaPredicted RBP14.47□□□□□ -0.09
POLR2D-201ENST00000272645 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
POLR2D-201ENST00000272645 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
POLR2D-201ENST00000272645 EEA1Q15075 1411 aa14.42□□□□□ -0.1
POLR2D-201ENST00000272645 CSRNP3Q8WYN3 585 aa14.41□□□□□ -0.1
POLR2D-201ENST00000272645 SYNJ1O43426 1573 aa14.4□□□□□ -0.1
POLR2D-201ENST00000272645 KIF21BO75037 1637 aa14.4□□□□□ -0.1
POLR2D-201ENST00000272645 GOLGA3Q08378 1498 aa14.39□□□□□ -0.11
POLR2D-201ENST00000272645 CLIP1P30622 1438 aa14.35□□□□□ -0.11
POLR2D-201ENST00000272645 PEG3Q9GZU2 1588 aa14.33□□□□□ -0.11
POLR2D-201ENST00000272645 MYT1Q01538 1121 aa14.31□□□□□ -0.12
POLR2D-201ENST00000272645 YTHDC1Q96MU7 727 aaKnown RBP14.31□□□□□ -0.12
POLR2D-201ENST00000272645 VPS8Q8N3P4 1428 aa14.29□□□□□ -0.12
POLR2D-201ENST00000272645 DNAJC5BQ9UF47 199 aa14.27□□□□□ -0.12
POLR2D-201ENST00000272645 RAPGEF2Q9Y4G8 1499 aa14.27□□□□□ -0.13
POLR2D-201ENST00000272645 CEP164Q9UPV0 1460 aa14.26□□□□□ -0.13
POLR2D-201ENST00000272645 DHX57Q6P158 1386 aaKnown RBP14.24□□□□□ -0.13
POLR2D-201ENST00000272645 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
POLR2D-201ENST00000272645 BAZ1BQ9UIG0 1483 aaKnown RBP14.23□□□□□ -0.13
POLR2D-201ENST00000272645 UBTFP17480 764 aaKnown RBP14.21□□□□□ -0.13
POLR2D-201ENST00000272645 SUPT16HQ9Y5B9 1047 aaKnown RBP14.19□□□□□ -0.14
POLR2D-201ENST00000272645 CUX2O14529 1486 aa14.17□□□□□ -0.14
POLR2D-201ENST00000272645 ARAP1Q96P48 1450 aa14.16□□□□□ -0.14
POLR2D-201ENST00000272645 TOP2BQ02880 1626 aa14.12□□□□□ -0.15
POLR2D-201ENST00000272645 PRXQ9BXM0 1461 aa14.11□□□□□ -0.15
POLR2D-201ENST00000272645 TSHZ2Q9NRE2 1034 aa14.11□□□□□ -0.15
POLR2D-201ENST00000272645 CLSPNQ9HAW4 1339 aa14.11□□□□□ -0.15
POLR2D-201ENST00000272645 BIVM-ERCC5R4GMW8 1640 aa14.1□□□□□ -0.15
POLR2D-201ENST00000272645 RRBP1Q9P2E9 1410 aaKnown RBP14.1□□□□□ -0.15
POLR2D-201ENST00000272645 KANK4Q5T7N3 995 aaPredicted RBP14.09□□□□□ -0.15
POLR2D-201ENST00000272645 KCNH8Q96L42 1107 aa14.08□□□□□ -0.16
POLR2D-201ENST00000272645 MAPKBP1O60336 1514 aa14.07□□□□□ -0.16
POLR2D-201ENST00000272645 ATAD2BQ9ULI0 1458 aa14.06□□□□□ -0.16
POLR2D-201ENST00000272645 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
POLR2D-201ENST00000272645 CC2D2AQ9P2K1 1620 aa13.98□□□□□ -0.17
POLR2D-201ENST00000272645 ARHGAP35Q9NRY4 1499 aa13.95□□□□□ -0.18
POLR2D-201ENST00000272645 CUX1P39880 1505 aa13.94□□□□□ -0.18
POLR2D-201ENST00000272645 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
POLR2D-201ENST00000272645 ANP32EQ9BTT0 268 aa13.89□□□□□ -0.19
POLR2D-201ENST00000272645 CCNB3Q8WWL7 1395 aa13.88□□□□□ -0.19
POLR2D-201ENST00000272645 RAB3GAP2Q9H2M9 1393 aa13.86□□□□□ -0.19
POLR2D-201ENST00000272645 PPP1R15AO75807 674 aaPredicted RBP13.85□□□□□ -0.19
POLR2D-201ENST00000272645 RANGAP1P46060 587 aaPredicted RBP13.85□□□□□ -0.19
POLR2D-201ENST00000272645 TIAM1Q13009 1591 aa13.83□□□□□ -0.2
POLR2D-201ENST00000272645 MAP3K1Q13233 1512 aa13.82□□□□□ -0.2
POLR2D-201ENST00000272645 NCAPD3P42695 1498 aa13.8□□□□□ -0.2
POLR2D-201ENST00000272645 KDM5BQ9UGL1 1544 aa13.79□□□□□ -0.2
POLR2D-201ENST00000272645 PHLDB1Q86UU1 1377 aa13.78□□□□□ -0.2
POLR2D-201ENST00000272645 APLP2Q06481 763 aa13.76□□□□□ -0.21
POLR2D-201ENST00000272645 MSH5O43196 834 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms