Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BRF2Q9HAW0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
BRF2Q9HAW0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.46■□□□□ 0.54
BRF2Q9HAW0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
BRF2Q9HAW0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 FP475955.4-201ENST00000623131 1990 ntBASIC18.44■□□□□ 0.54
BRF2Q9HAW0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
BRF2Q9HAW0 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 AIRN-201ENST00000601203 4374 ntBASIC18.43■□□□□ 0.54
BRF2Q9HAW0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
BRF2Q9HAW0 ESRRAP1-201ENST00000400596 1257 ntBASIC18.43■□□□□ 0.54
BRF2Q9HAW0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms