Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CYSTM1Q9H1C7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 CICP14-201ENST00000629111 2732 ntBASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CYSTM1Q9H1C7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 AC007950.2-201ENST00000615045 2347 ntBASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 CAHM-201ENST00000604200 896 ntBASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CYSTM1Q9H1C7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms