Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 KRT17P3-201ENST00000420566 1262 ntBASIC17.56■□□□□ 0.4
NIPAL3Q6P499 POM121L13P-201ENST00000422362 380 ntBASIC17.56■□□□□ 0.4
NIPAL3Q6P499 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 AL121906.2-201ENST00000621597 723 ntBASIC17.56■□□□□ 0.4
NIPAL3Q6P499 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 AC116351.2-201ENST00000606540 1585 ntBASIC17.56■□□□□ 0.4
NIPAL3Q6P499 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NIPAL3Q6P499 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 AL138781.2-201ENST00000617896 1843 ntBASIC17.55■□□□□ 0.4
NIPAL3Q6P499 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NIPAL3Q6P499 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NIPAL3Q6P499 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NIPAL3Q6P499 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NIPAL3Q6P499 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms