Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.48■□□□□ 0.55
HTR1EP28566 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.48■□□□□ 0.55
HTR1EP28566 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.48■□□□□ 0.55
HTR1EP28566 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.48■□□□□ 0.55
HTR1EP28566 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 FAM197Y4-202ENST00000622692 608 ntBASIC18.48■□□□□ 0.55
HTR1EP28566 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
HTR1EP28566 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.48■□□□□ 0.55
HTR1EP28566 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.48■□□□□ 0.55
HTR1EP28566 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
HTR1EP28566 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
HTR1EP28566 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HTR1EP28566 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
HTR1EP28566 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.47■□□□□ 0.55
HTR1EP28566 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.47■□□□□ 0.55
HTR1EP28566 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
HTR1EP28566 AC100791.3-201ENST00000617619 330 ntBASIC18.47■□□□□ 0.55
HTR1EP28566 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
HTR1EP28566 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
HTR1EP28566 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.46■□□□□ 0.55
HTR1EP28566 AC005082.1-201ENST00000413042 2259 ntBASIC18.46■□□□□ 0.55
HTR1EP28566 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.46■□□□□ 0.55
HTR1EP28566 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HTR1EP28566 MCRIP2P1-201ENST00000394346 511 ntBASIC18.46■□□□□ 0.55
HTR1EP28566 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.46■□□□□ 0.55
HTR1EP28566 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.46■□□□□ 0.55
HTR1EP28566 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.46■□□□□ 0.55
HTR1EP28566 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HTR1EP28566 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.46■□□□□ 0.55
HTR1EP28566 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
HTR1EP28566 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
HTR1EP28566 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.54
HTR1EP28566 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HTR1EP28566 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.45■□□□□ 0.54
HTR1EP28566 AC006333.2-201ENST00000607957 2099 ntBASIC18.45■□□□□ 0.54
HTR1EP28566 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
HTR1EP28566 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
HTR1EP28566 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.45■□□□□ 0.54
HTR1EP28566 ECEL1P3-201ENST00000427961 737 ntBASIC18.45■□□□□ 0.54
HTR1EP28566 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.45■□□□□ 0.54
HTR1EP28566 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.45■□□□□ 0.54
HTR1EP28566 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.45■□□□□ 0.54
HTR1EP28566 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.45■□□□□ 0.54
HTR1EP28566 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.45■□□□□ 0.54
HTR1EP28566 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.45■□□□□ 0.54
HTR1EP28566 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.45■□□□□ 0.54
HTR1EP28566 AC073912.3-201ENST00000624414 853 ntBASIC18.45■□□□□ 0.54
HTR1EP28566 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.45■□□□□ 0.54
HTR1EP28566 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
HTR1EP28566 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms