Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.78□□□□□ -0.04
RAB4AP20338 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RAB4AP20338 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC14.78□□□□□ -0.04
RAB4AP20338 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RAB4AP20338 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.77□□□□□ -0.04
RAB4AP20338 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC14.77□□□□□ -0.04
RAB4AP20338 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.77□□□□□ -0.04
RAB4AP20338 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RAB4AP20338 CREM-229ENST00000474362 1030 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB4AP20338 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.77□□□□□ -0.05
RAB4AP20338 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB4AP20338 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.77□□□□□ -0.05
RAB4AP20338 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.77□□□□□ -0.05
RAB4AP20338 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
RAB4AP20338 TMEM179-206ENST00000616017 1645 ntBASIC14.77□□□□□ -0.05
RAB4AP20338 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 AC068418.2-201ENST00000577309 3703 ntBASIC14.77□□□□□ -0.05
RAB4AP20338 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RAB4AP20338 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.77□□□□□ -0.05
RAB4AP20338 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RAB4AP20338 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
RAB4AP20338 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB4AP20338 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB4AP20338 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB4AP20338 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 SERBP1P1-201ENST00000396021 1160 ntBASIC14.76□□□□□ -0.05
RAB4AP20338 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB4AP20338 AC136469.2-201ENST00000623944 1028 ntBASIC14.76□□□□□ -0.05
RAB4AP20338 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RAB4AP20338 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.76□□□□□ -0.05
RAB4AP20338 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
RAB4AP20338 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC14.76□□□□□ -0.05
RAB4AP20338 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.76□□□□□ -0.05
RAB4AP20338 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RAB4AP20338 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.75□□□□□ -0.05
RAB4AP20338 PTGES2-AS1-201ENST00000443493 2100 ntBASIC14.75□□□□□ -0.05
RAB4AP20338 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.75□□□□□ -0.05
RAB4AP20338 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.75□□□□□ -0.05
RAB4AP20338 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC14.75□□□□□ -0.05
RAB4AP20338 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.75□□□□□ -0.05
RAB4AP20338 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC14.75□□□□□ -0.05
RAB4AP20338 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms