Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM2P07951 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TPM2P07951 MCRIP2P1-201ENST00000394346 511 ntBASIC21.91■■□□□ 1.1
TPM2P07951 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.91■■□□□ 1.1
TPM2P07951 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.91■■□□□ 1.1
TPM2P07951 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TPM2P07951 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.91■■□□□ 1.1
TPM2P07951 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPM2P07951 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
TPM2P07951 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.91■■□□□ 1.1
TPM2P07951 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
TPM2P07951 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
TPM2P07951 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TPM2P07951 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC21.91■■□□□ 1.1
TPM2P07951 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.9■■□□□ 1.1
TPM2P07951 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.9■■□□□ 1.1
TPM2P07951 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC21.9■■□□□ 1.1
TPM2P07951 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
TPM2P07951 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.9■■□□□ 1.1
TPM2P07951 AC016405.3-201ENST00000607710 860 ntBASIC21.9■■□□□ 1.1
TPM2P07951 AC100791.3-201ENST00000617619 330 ntBASIC21.9■■□□□ 1.1
TPM2P07951 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.9■■□□□ 1.1
TPM2P07951 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TPM2P07951 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TPM2P07951 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TPM2P07951 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 AC009053.2-201ENST00000563701 2365 ntBASIC21.9■■□□□ 1.1
TPM2P07951 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.9■■□□□ 1.1
TPM2P07951 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
TPM2P07951 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
TPM2P07951 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TPM2P07951 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TPM2P07951 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM2P07951 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.89■■□□□ 1.1
TPM2P07951 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
TPM2P07951 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.89■■□□□ 1.1
TPM2P07951 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
TPM2P07951 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
TPM2P07951 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.89■■□□□ 1.09
TPM2P07951 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM2P07951 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM2P07951 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM2P07951 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM2P07951 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
TPM2P07951 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.89■■□□□ 1.09
TPM2P07951 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21.89■■□□□ 1.09
TPM2P07951 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
TPM2P07951 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21.88■■□□□ 1.09
TPM2P07951 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.88■■□□□ 1.09
TPM2P07951 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
TPM2P07951 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
TPM2P07951 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.88■■□□□ 1.09
TPM2P07951 AC016769.1-201ENST00000409132 1010 ntBASIC21.88■■□□□ 1.09
TPM2P07951 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.88■■□□□ 1.09
TPM2P07951 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
TPM2P07951 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
TPM2P07951 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
TPM2P07951 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 KRT8P17-201ENST00000453110 1448 ntBASIC21.88■■□□□ 1.09
TPM2P07951 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TPM2P07951 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM2P07951 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM2P07951 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.87■■□□□ 1.09
TPM2P07951 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
TPM2P07951 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TPM2P07951 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
TPM2P07951 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms