Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 NTF6G-201ENST00000591094 616 ntBASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CYP2T3P-201ENST00000601990 817 ntBASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 WIZP1-201ENST00000531444 2299 ntBASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV8-1A0A0A6YYK1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AL390961.4-201ENST00000623958 2535 ntBASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC023632.3-201ENST00000521633 145 ntBASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AC068338.2-201ENST00000563278 1430 ntBASIC14.66□□□□□ -0.06
TRAV8-1A0A0A6YYK1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 AL133373.2-201ENST00000623187 2828 ntBASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 FZD10-202ENST00000539839 3282 ntBASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAV8-1A0A0A6YYK1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms