Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 TPRG1LP1-201ENST00000598702 760 ntBASIC12.27□□□□□ -0.45
LINC00575Q6W349 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 KRT8P20-201ENST00000423953 1409 ntBASIC12.27□□□□□ -0.45
LINC00575Q6W349 AC087633.2-202ENST00000565166 1439 ntBASIC12.27□□□□□ -0.45
LINC00575Q6W349 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 FP475955.4-201ENST00000623131 1990 ntBASIC12.27□□□□□ -0.45
LINC00575Q6W349 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
LINC00575Q6W349 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
LINC00575Q6W349 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 AC008764.7-201ENST00000593779 1081 ntBASIC12.26□□□□□ -0.45
LINC00575Q6W349 FGF8-207ENST00000618991 856 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.26□□□□□ -0.45
LINC00575Q6W349 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
LINC00575Q6W349 PHGDH-210ENST00000641115 1638 ntBASIC12.26□□□□□ -0.45
LINC00575Q6W349 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
LINC00575Q6W349 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 CD44-222ENST00000526025 1052 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 AC012414.1-201ENST00000556676 535 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 DUX4L2-201ENST00000561772 1275 ntBASIC12.25□□□□□ -0.45
LINC00575Q6W349 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC12.25□□□□□ -0.45
LINC00575Q6W349 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms