Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST1H3AP68431 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H3AP68431 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 AC004264.1-201ENST00000608354 794 ntBASIC16.9■□□□□ 0.3
HIST1H3AP68431 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H3AP68431 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H3AP68431 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
HIST1H3AP68431 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
HIST1H3AP68431 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 AC133681.1-201ENST00000465482 601 ntBASIC16.89■□□□□ 0.29
HIST1H3AP68431 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 RN7SL471P-201ENST00000580476 299 ntBASIC16.89■□□□□ 0.29
HIST1H3AP68431 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIST1H3AP68431 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST1H3AP68431 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 LINC01465-201ENST00000408887 1940 ntBASIC16.88■□□□□ 0.29
HIST1H3AP68431 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 LY6E-205ENST00000519611 635 ntTSL 3 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST1H3AP68431 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.88■□□□□ 0.29
HIST1H3AP68431 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST1H3AP68431 AC098818.2-201ENST00000564925 2320 ntBASIC16.87■□□□□ 0.29
HIST1H3AP68431 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 AP000974.1-201ENST00000623909 2387 ntBASIC16.87■□□□□ 0.29
HIST1H3AP68431 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST1H3AP68431 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms