Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 ESPNP-201ENST00000270691 2015 ntBASIC16.71■□□□□ 0.27
HLA-DQB1P01920 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HLA-DQB1P01920 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB1P01920 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB1P01920 AC099398.1-201ENST00000567919 2776 ntBASIC16.71■□□□□ 0.26
HLA-DQB1P01920 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB1P01920 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.71■□□□□ 0.26
HLA-DQB1P01920 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
HLA-DQB1P01920 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 PHGDH-210ENST00000641115 1638 ntBASIC16.7■□□□□ 0.26
HLA-DQB1P01920 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 TERF1P2-201ENST00000583350 1212 ntBASIC16.7■□□□□ 0.26
HLA-DQB1P01920 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HLA-DQB1P01920 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 AC020763.4-201ENST00000623414 4170 ntBASIC16.69■□□□□ 0.26
HLA-DQB1P01920 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.69■□□□□ 0.26
HLA-DQB1P01920 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HLA-DQB1P01920 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms