Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TNXA-203ENST00000507684 2038 ntBASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 KRASP1-201ENST00000407852 552 ntBASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC239809.2-201ENST00000415381 517 ntBASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC128676.1-201ENST00000454392 318 ntBASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RN7SL471P-201ENST00000580476 299 ntBASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 AC004408.2-201ENST00000623613 2777 ntBASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.08■□□□□ 0.33
IGKV1D-43A0A0B4J1Z2 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 POU5F1P3-201ENST00000428824 1078 ntBASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.08■□□□□ 0.32
IGKV1D-43A0A0B4J1Z2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms