Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF11Q9Y3C5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF11Q9Y3C5 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF11Q9Y3C5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF11Q9Y3C5 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF11Q9Y3C5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF11Q9Y3C5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RNF11Q9Y3C5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
RNF11Q9Y3C5 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF11Q9Y3C5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
RNF11Q9Y3C5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 AC142086.2-201ENST00000569753 217 ntBASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF11Q9Y3C5 AC007613.1-201ENST00000572811 2597 ntBASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF11Q9Y3C5 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 SOX15-203ENST00000570788 1093 ntBASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 AC120498.8-201ENST00000614275 531 ntBASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF11Q9Y3C5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms