Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
PDLIM5Q96HC4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ESRRAP1-201ENST00000400596 1257 ntBASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 AC233263.1-201ENST00000578059 224 ntBASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
PDLIM5Q96HC4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 TNXA-203ENST00000507684 2038 ntBASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 AC087289.5-201ENST00000586076 3175 ntBASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
PDLIM5Q96HC4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 AL161938.1-201ENST00000569833 2180 ntBASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 AC133681.1-201ENST00000465482 601 ntBASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
PDLIM5Q96HC4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms