Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP1B3P54709 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 AC090340.1-201ENST00000620778 4980 ntBASIC16.8■□□□□ 0.28
ATP1B3P54709 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP1B3P54709 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ATP1B3P54709 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 AC006970.2-201ENST00000450065 779 ntBASIC16.8■□□□□ 0.28
ATP1B3P54709 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
ATP1B3P54709 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.8■□□□□ 0.28
ATP1B3P54709 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATP1B3P54709 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.8■□□□□ 0.28
ATP1B3P54709 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATP1B3P54709 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
ATP1B3P54709 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP1B3P54709 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ATP1B3P54709 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ATP1B3P54709 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP1B3P54709 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.79■□□□□ 0.28
ATP1B3P54709 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.79■□□□□ 0.28
ATP1B3P54709 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
ATP1B3P54709 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ATP1B3P54709 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.79■□□□□ 0.28
ATP1B3P54709 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP1B3P54709 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP1B3P54709 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP1B3P54709 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP1B3P54709 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP1B3P54709 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ATP1B3P54709 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP1B3P54709 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 AC007613.1-201ENST00000572811 2597 ntBASIC16.78■□□□□ 0.28
ATP1B3P54709 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP1B3P54709 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 MIR935-201ENST00000401179 91 ntBASIC16.78■□□□□ 0.28
ATP1B3P54709 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 MIPEPP3-201ENST00000412105 444 ntBASIC16.78■□□□□ 0.28
ATP1B3P54709 AC073210.2-201ENST00000430369 194 ntBASIC16.78■□□□□ 0.28
ATP1B3P54709 CROCCP5-201ENST00000436658 830 ntBASIC16.78■□□□□ 0.28
ATP1B3P54709 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 AC083906.2-201ENST00000511578 360 ntBASIC16.78■□□□□ 0.28
ATP1B3P54709 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ATP1B3P54709 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP1B3P54709 AC005829.2-201ENST00000571422 1056 ntBASIC16.78■□□□□ 0.28
ATP1B3P54709 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP1B3P54709 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP1B3P54709 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP1B3P54709 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP1B3P54709 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP1B3P54709 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP1B3P54709 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms